AT1G16110.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.958 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : wall associated kinase-like 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
WAK-like kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
wall associated kinase-like 6 (WAKL6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 1 (TAIR:AT1G16120.1); Has 122937 Blast hits to 120828 proteins in 4420 species: Archae - 135; Bacteria - 14043; Metazoa - 45685; Fungi - 10517; Plants - 33921; Viruses - 506; Other Eukaryotes - 18130 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:5518381..5520470 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 70821.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.25 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 642 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKKTKTYQVF CIAALSVLTL QLINGSSAAT PPPPNSNSST SCNRACGGVS IPFPFGIGKD CYLNGWYEVI CNTSTSGSSG TTVPFLSRIN SEVVNISLPD 101: GKKLYGVVHI KGPVTSLGCS SSSSSSQVSE MSLPNLNVTG RGSPYFLTDE NCLVMVGCGT KALMKDIESE ILGCESSCED SKSSEEVTNS KCDGYKCCQA 201: RIPLERPQVI GINIENTSAT RGKEGCSVAF LTNKRYAPMN VTEPEQFHAG GYAVVELGWY FDTSDSRYRN PLGCRNMTRY SSYSSFDKCS CEYDYFSGMS 301: YRICYCNYGY TGNPYLRHGC IDIDECEGHH NCGEGTCVNM PGTHSCEPKI TKPEKASVLQ GVLISLGVLL FVLGILGLYK FIKKRTRIIR NKNFFKRNGG 401: LLLKQQLITK NGNVDMSRIF SSKELKKATD NFSMNRVLGQ GGQGTVYKGM LAEGRIVAVK RSKVVGEGKM EEFINEVVLL SQINHRNIVK LLGCCLETEV 501: PVLVYEYIPN GDLFKRLHEK SESNDYTMTW EVRLRIAIEI AGALSYMHSA ASIPIYHRDI KTTNILLDEK YRAKVSDFGT SRSITIAQTH LTTLVAGTFG 601: YMDPEYFLSS QYTDKSDVYS FGVVLVELIT GEKPLSRKRI GN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)