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AT5G39020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Malectin/receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G39030.1); Has 113939 Blast hits to 112470 proteins in 4297 species: Archae - 118; Bacteria - 12172; Metazoa - 42643; Fungi - 9539; Plants - 32560; Viruses - 275; Other Eukaryotes - 16632 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G39020-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:KOG1187
EMBL:AB016892EMBL:CP002688EnsemblPlants:AT5G39020EnsemblPlants:AT5G39020.1
entrez:833894Gene3D:2.60.120.200GeneID:833894Genevisible:Q9FID6
GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT5G39020.1
hmmpanther:PTHR27009hmmpanther:PTHR27009:SF21HOGENOM:HOG000238317InParanoid:Q9FID6
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788iPTMnet:Q9FID6KEGG:ath:AT5G39020
PaxDb:Q9FID6Pfam:PF00069Pfam:PF12819Pfam:Q9FID6
Pfscan:PS50011PhylomeDB:Q9FID6PRIDE:Q9FID6PRO:PR:Q9FID6
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FID6
Proteomes:UP000006548RefSeq:NP_198718.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9FID6STRING:3702.AT5G39020.1SUPFAM:SSF56112
TAIR:AT5G39020TMHMM:TMhelixUniGene:At.55239UniProt:Q9FID6
Coordinates (TAIR10) chr5:+:15616917..15619358
Molecular Weight (calculated) 90452.80 Da
IEP (calculated) 6.94
GRAVY (calculated) -0.05
Length 813 amino acids
Sequence (TAIR10)
(BLAST)
001: MNCNVLFLLS VLVSVTAGVT AAYHPTDVFL FNCGDTSNNV DNSGRNWTVE SRQILSSNLV NASFTSEASY QKAGVSRIPY MKARIFRSEF TYSFPVTPGS
101: IFLRLYFYPT QYKSGFDAVN SFFSVKVNGF TLLRNFNADS TVQASIPLSN SLIKEFIIPV HQTLNLTFTP SKNLLAFVNG IEIVSMPDRF YSKGGFDNVL
201: RNVSSDVDFQ IDNSTAFESV HRLNVGGQIV NEVDDSGMFR RWLSDDSFGN SGSIVNVPGV KINYTEKTPA YVAPYDVYAT SRLMGNSSNL MFNLTGMFLT
301: VDAGYNYLVR LHFCETLPQV TKAGQRVFSI FVEDKMAKKE TDVIRLSGGP RIPMYLDFSV YVGFESGMIQ PELRLDLVPL KDTNQTYYDA ILSGVEILKL
401: NDSDGNLARP NPELLVSTDS TPDDSNVTPP IKGKPHVLVI ILIVVGSVIG LATFIVIIML LIRQMKRKKN KKENSVIMFK LLLKQYIYAE LKKITKSFSH
501: TVGKGGFGTV YRGNLSNGRT VAVKVLKDLK GNGDDFINEV TSMSQTSHVN IVSLLGFCYE GSKRAIISEF LEHGSLDQFI SRNKSLTPNV TTLYGIALGI
601: ARGLEYLHYG CKTRIVHFDI KPQNILLDDN FCPKVADFGL AKLCEKRESI LSLIDTRGTI GYIAPEVVSR MYGGISHKSD VYSYGMLVLD MIGARNKVET
701: TTCNGSTAYF PDWIYKDLEN GDQTWIIGDE INEEDNKIVK KMILVSLWCI RPCPSDRPPM NKVVEMIEGS LDALELPPKP SRHISTELVL ESSSLSDGQE
801: AEKQTQTLDS TII
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)