AT2G44490.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:peroxisome 1.000 ASURE: peroxisome What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Glycosyl hydrolase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
PENETRATION 2 (PEN2); FUNCTIONS IN: thioglucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: defense response to fungus, incompatible interaction, glucosinolate metabolic process, defense response to bacterium, indole glucosinolate catabolic process, defense response by callose deposition in cell wall; LOCATED IN: peroxisome, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 11449 Blast hits to 11083 proteins in 1474 species: Archae - 140; Bacteria - 7930; Metazoa - 713; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:18364872..18367515 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 63918.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.82 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 560 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAHLQRTFPT EMSKGRASFP KGFLFGTASS SYQYEGAVNE GARGQSVWDH FSNRFPHRIS DSSDGNVAVD FYHRYKEDIK RMKDINMDSF RLSIAWPRVL 101: PYGKRDRGVS EEGIKFYNDV IDELLANEIT PLVTIFHWDI PQDLEDEYGG FLSEQIIDDF RDYASLCFER FGDRVSLWCT MNEPWVYSVA GYDTGRKAPG 201: RCSKYVNGAS VAGMSGYEAY IVSHNMLLAH AEAVEVFRKC DHIKNGQIGI AHNPLWYEPY DPSDPDDVEG CNRAMDFMLG WHQHPTACGD YPETMKKSVG 301: DRLPSFTPEQ SKKLIGSCDY VGINYYSSLF VKSIKHVDPT QPTWRTDQGV DWMKTNIDGK QIAKQGGSEW SFTYPTGLRN ILKYVKKTYG NPPILITENG 401: YGEVAEQSQS LYMYNPSIDT ERLEYIEGHI HAIHQAIHED GVRVEGYYVW SLLDNFEWNS GYGVRYGLYY IDYKDGLRRY PKMSALWLKE FLRFDQEDDS 501: STSKKEEKKE SYGKQLLHSV QDSQFVHSIK DSGALPAVLG SLFVVSATVG TSLFFKGANN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)