AT5G39030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT5G39020.1); Has 115892 Blast hits to 114373 proteins in 4327 species: Archae - 137; Bacteria - 12603; Metazoa - 43642; Fungi - 9860; Plants - 32580; Viruses - 298; Other Eukaryotes - 16772 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:15620066..15622486 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90675.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.73 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 806 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MICFILFVFS FLVSVSATAP YKPDDVFLIN CGETDVPFDN HGRTWTQEEK NILPKNSDNA SFSSVVSYKE ESGIPQVPYM TARIFRSDFT YSFPVSPGWK 101: FLRLYFYPTS YKSGFDAVNS FVSVTVNDFT LLQNFSADLT VKASIPESKS LIKEFIVPVY LTLNLTFRPS NNSLAFVNGI EIVSMPDRFY SKGGFDDLIT 201: NVGSLIDFEI DNSTASETVH RLNVGGHMVD EVNDSGMFRR WLSDDYEFLI GGVSPYMPDV NISYTEKTPA YVAPAYVYST CRMMGNAQDT YLNLNFNLTW 301: LFTVDAGFSY LVRLHFFEKY LNKANQRVFS IFLGNQMARE EMDVIRLSGG PRIPIYLDFR IYVGSESGPR PDLRLDLHPL VKDNPEYYEA ILNGVEILKL 401: NNSGNLAIIQ DNELKPNPPL SSNLTPNHVT QQIKGKSSHL LVKIFIAVGP GTGLATFVVV LMLWMRQMKR KNRKEERVVM FKKLLNMYTY AELKKITKSF 501: SYIIGKGGFG TVYGGNLSNG RKVAVKVLKD LKGSAEDFIN EVASMSQTSH VNIVSLLGFC FEGSKRAIVY EFLENGSLDQ FMSRNKSLTQ DVTTLYGIAL 601: GIARGLEYLH YGCKTRIVHF DIKPQNILLD GNLCPKVSDF GLAKLCEKRE SVLSLMDTRG TIGYIAPEVF SRMYGRVSHK SDVYSFGMLV IDMIGARSKE 701: IVETVDSAAS STYFPDWIYK DLEDGEQTWI FGDEITKEEK EIAKKMIVVG LWCIQPCPSD RPSMNRVVEM MEGSLDALEI PPKPSMHIST EVITESSSLS 801: DGGEDV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)