AT3G26230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.884 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 24 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 24 (CYP71B24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 3 (TAIR:AT3G26220.1); Has 33577 Blast hits to 33331 proteins in 1707 species: Archae - 48; Bacteria - 3554; Metazoa - 11980; Fungi - 7136; Plants - 9645; Viruses - 6; Other Eukaryotes - 1208 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:9598200..9599892 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56812.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 498 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSILLYFIAL LSLIIIKKIK DSNRNLPPSP LKLPVIGNLY QLRGLFHKCL HDLSKKHGPV LLLRLGFLDM VVISSTEAAE EALKVHDLEC CTRPITNVTS 101: KLWRDGQDIG LAPYGESLRE LRKLSFLKFF STTKVRSFRY IREEENDLMV KKLKEAALKK SSVDLSQTLF GLVGSIIFRS AFGQRFDEGN HVNAEKIEDL 201: MFEVQKLGAL SNSDLFPGGL GWFVDFVSGH NKKLHKVFVE VDTLLNHIID DHLKNSIEEI THDRPDIIDS LLDMIRKQEQ GDSFKLTIDN LKGIIQDIYL 301: AGVDTSAITM IWAMAELVKN PRVMKKVQDE IRTCIGIKQN EKIEEDDVDK LQYLKLVVKE TLRLHPAAPL LLPRETMSQI KIQGYNIPSK TILLVNVWSI 401: GRDPKHWKNP EEFNPERFID CPIDYKGNSF EMLPFGSGRR ICPGIAFAIA TVELGLLNLL YHFDWRLPEE DKDLDMEEAG DVTIIKKVPL KLVPVLHH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)