AT3G14620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 72, subfamily A, polypeptide 8 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 72, subfamily A, polypeptide 8 (CYP72A8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 7 (TAIR:AT3G14610.1); Has 32806 Blast hits to 32698 proteins in 1616 species: Archae - 69; Bacteria - 4592; Metazoa - 11483; Fungi - 6886; Plants - 8292; Viruses - 3; Other Eukaryotes - 1481 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4914978..4916853 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58646.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.71 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 515 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDTKISAVA VAAAVVVVTT VTVWIWKGLN VAWLRPKKNE AYLKRQGLSG TPFTFLVGDI KREASMVEQE KSRPINLTDD YTHRVMPLIQ QTVKDHGKTS 101: YMWMGPIASV IVTKPEHIKD VLNRVYDFPK PPVHPIVELF ATGVALYEGE KWSKHRKIIN PSFHLEKLKI MIPAFYESCS EMISKWEKLV TEQGSSNEID 201: VWPYLGDLTS DVISRTAFGS SYEEGKRIFE LQEEQGRRVL KALELAFIPG MRFLPTKNNL RMRQINKEVK SRLREIIMKR QRGMDTGEAP KNDLLGILLE 301: SNSGDHGMSI EDVVEECRLF HFAGQETTAV LLVWTMIMLS HHQKWQDQAR EEILKVIGKN NKPNFDALSR LKTMSMILNE VLRLYPPGIL LGRTVEKETK 401: LGEDMTLPGG AQVVIPVLMV HRDPELWGED VHEFNPERFA DGISKATKNQ VSFLPFGWGP RFCPGQNFAL MEAKMALVLI LQRFSFELSP SYTHAPHTVL 501: TLHPQFGAPL IFHML |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)