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AT4G27830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 10 (BGLU10); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 9 (TAIR:AT4G27820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G27830-MONOMERBioCyc:MetaCyc:MONOMER-18515CAZy:GH1EC:3.2.1.21
eggNOG:COG2723eggNOG:KOG0626EMBL:AL078579EMBL:AL161571
EMBL:AY057518EMBL:BT002654EMBL:CP002687EnsemblPlants:AT4G27830
EnsemblPlants:AT4G27830.1entrez:828896Gene3D:3.20.20.80GeneID:828896
Genevisible:Q93ZI4GO:GO:0005773GO:GO:0005975GO:GO:0008422
GO:GO:0046283Gramene:AT4G27830.1gramene_pathway:3.5.2.17gramene_pathway:PWY-5691
hmmpanther:PTHR10353hmmpanther:PTHR10353:SF29HOGENOM:HOG000088630InParanoid:Q93ZI4
InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853InterPro:IPR033132
KEGG:ath:AT4G27830KO:K01188OMA:VHYSDIVPANTHER:PTHR10353
PaxDb:Q93ZI4Pfam:PF00232Pfam:Q93ZI4PhylomeDB:Q93ZI4
PIR:T09022PRIDE:Q93ZI4PRINTS:PR00131PRO:PR:Q93ZI4
PROSITE:PS00653ProteinModelPortal:Q93ZI4Proteomes:UP000006548RefSeq:NP_567787.1
scanprosite:PS00653SMR:Q93ZI4STRING:3702.AT4G27830.1SUPFAM:SSF51445
TAIR:AT4G27830tair10-symbols:BGLU10UniGene:At.23641UniProt:Q93ZI4
Coordinates (TAIR10) chr4:-:13861794..13864489
Molecular Weight (calculated) 57081.40 Da
IEP (calculated) 5.32
GRAVY (calculated) -0.24
Length 508 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLYSLLSVF LVILLATSDS DAFTRNNFPK DFLFGAATSA YQWEGAVAED GRTPSVWDTF SHTYNRGNLG NGDITSDGYH KYKEDVKLMA EMGLESFRFS
101: ISWSRLIPNG RGLINPKGLL FYKNLIKELI SHGIEPHVTL YHYDLPQSLE DEYGGWINRK IIEDFTAYAD VCFREFGEDV KLWTTINEAT IFAIGSYDQG
201: ISPPGHCSPN KFINCTSGNS STEPYLAGHN ILLAHASASK LYKLKYKSTQ KGSIGLSIFA FGLSPYTNSK DDEIATQRAK AFFYGWMLKP LVFGDYPDEM
301: KRTVGSRLPV FSEEESEQLK GSSDFIGIIH YTTFYVTNKP SPSIFPSMNE GFFKDMGVYM ISAANSSFLL WEATPWGLEG ILEYIKQSYN NPPIYILENG
401: MPMGRDSTLQ DTQRIEFIQA YIGAMLNAIK NGSDTRGYFV WSMIDLYELL SGYTTSFGMY YVNFSDPGRK RTPKLSASWY TGFLNGTIDV ATQDTIQLQS
501: NISGSSSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)