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AT4G33540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : metallo-beta-lactamase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
metallo-beta-lactamase family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: response to arsenic, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 1592 Blast hits to 1592 proteins in 436 species: Archae - 145; Bacteria - 835; Metazoa - 30; Fungi - 10; Plants - 78; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0491eggNOG:ENOG410IIK4EMBL:AK226283EMBL:AY093148
EMBL:BT003391EMBL:CP002687EnsemblPlants:AT4G33540EnsemblPlants:AT4G33540.1
entrez:829493Gene3D:3.60.15.10GeneID:829493GO:GO:0046685
Gramene:AT4G33540.1hmmpanther:PTHR11935hmmpanther:PTHR11935:SF104HOGENOM:HOG000276654
InterPro:IPR001279KEGG:ath:AT4G33540ncoils:CoilOMA:TGDHLAW
Pfam:PF00753Pfam:PF13370PhylomeDB:Q8RWE1Proteomes:UP000006548
RefSeq:NP_195080.2SMART:SM00849STRING:3702.AT4G33540.1SUPFAM:SSF54862
SUPFAM:SSF56281TAIR:AT4G33540UniGene:At.44785UniProt:Q8RWE1
Coordinates (TAIR10) chr4:+:16130882..16133678
Molecular Weight (calculated) 39640.00 Da
IEP (calculated) 7.40
GRAVY (calculated) -0.40
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MASASFSAVS SLSYQFRSKE AIFSSKASCF SSTALSGRRV FGSIKAAQVT SHENPRRRTQ NVEGDIFVDN TCIDCDTCRW MVPDLFTRVD NMSAVTKQPT
101: CKEERLNALQ ALLSCPTGSI RTQTPPADIG EAQETFPLVV DKDTLPGVFH CGFHSKKSYG ATSYLILHRE GNILVDSPRY VEKLAGKIEM KGGVRYMFLT
201: HRDDVADHKK WADRFKSTRI LHSDDVEPST SDVELKLEGS GPWSIYEDVE LIHTPGHSEG SVCMFHKSLK ALFTGDHVIM TESGLSILEQ YNHGSVPLQL
301: ENVEKLINLD FNWLIPGHGR RVHFKDGDEK AKNLEALVQK HREKQLVSFS KSGKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)