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AT1G78380.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19329564 (2009): peroxisome
  • PMID:18998720 (2009): extracellular region
  • PMID:17644812 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16207701 (2006): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase TAU 19
Curator
Summary (TAIR10)
Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.
Computational
Description (TAIR10)
glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G78380-MONOMERBioCyc:MetaCyc:AT1G78380-MONOMERBioGrid:29393BRENDA:2.5.1.18
EC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC013430
EMBL:AF385691EMBL:AJ012571EMBL:AY078012EMBL:AY087032
EMBL:CP002684EnsemblPlants:AT1G78380EnsemblPlants:AT1G78380.1entrez:844174
Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:844174Genevisible:Q9ZRW8
GO:GO:0004364GO:GO:0004601GO:GO:0005737GO:GO:0005774
GO:GO:0005829GO:GO:0005886GO:GO:0006749GO:GO:0006979
GO:GO:0009407GO:GO:0009507GO:GO:0009570GO:GO:0042631
GO:GO:0043295GO:GO:0046686Gramene:AT1G78380.1hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF204HOGENOM:HOG000125749InParanoid:Q9ZRW8IntAct:Q9ZRW8
InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336iPTMnet:Q9ZRW8
KEGG:ath:AT1G78380KO:K00799OMA:FVDVAFVPaxDb:Q9ZRW8
Pfam:PF02798Pfam:PF13410Pfam:Q9ZRW8Pfscan:PS50404
Pfscan:PS50405PhylomeDB:Q9ZRW8PIR:T51607PRIDE:Q9ZRW8
PRO:PR:Q9ZRW8PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9ZRW8
Proteomes:UP000006548RefSeq:NP_565178.1SMR:Q9ZRW8STRING:3702.AT1G78380.1
SUPFAM:SSF47616SUPFAM:SSF52833SwissPalm:Q9ZRW8TAIR:AT1G78380
tair10-symbols:ATGSTU19tair10-symbols:GST8tair10-symbols:GSTU19UniGene:At.25493
UniGene:At.67704UniProt:Q9ZRW8
Coordinates (TAIR10) chr1:-:29486659..29487819
Molecular Weight (calculated) 25651.90 Da
IEP (calculated) 5.84
GRAVY (calculated) -0.42
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)