AT1G75750.1::SUBA5

AT1G75750.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
extracellular 1.000
What is SUBAcon?

Predictors

External Curations

SwissProt : extracellular 16381842

Experimental Localisations and PPI

FP	MS/MS	PPI
PMID:10737809 (2000): peroxisome	PMID:31818904 (2020): mitochondrion PMID:31673584 (2019): extracellular region plant-type cell wall PMID:31615849 (2019): plastid plastid thylakoid PMID:30783145 (2019): extracellular region apoplast PMID:30783145 (2019): extracellular region plant-type cell wall PMID:28865150 (2017): extracellular region plant-type cell wall PMID:28818374 (2017): extracellular region plant-type cell wall PMID:26572690 (2016): extracellular region plant-type cell wall PMID:19334764 (2009): plasma membrane PMID:19329564 (2009): peroxisome PMID:16287169 (2006): extracellular region	PMID:21798944 (2011): AT1G01910.1:Y2H: PMID:20706207 (2010): AT3G27240.1:None: PMID:20706207 (2010): AT2G44350.1:None: PMID:20706207 (2010): AT1G35720.1:None: PMID:20706207 (2010): AT4G35830.1:None: PMID:20706207 (2010): AT3G11630.1:None: PMID:20706207 (2010): AT4G09000.1:None: PMID:20706207 (2010): AT1G22300.1:None: PMID:19228333 (2009): AT3G54220.1:Y2H: PMID:19000166 (2009): AT2G42580.1:phage display:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT4G30270.1 extracellular [6.9] AT4G16563.1 extracellular [5.89] AT1G75760.1 endoplasmic reticulum [5.69] AT3G16570.1 extracellular [5.53] AT2G48030.1 mitochondrion [5.28] AT5G09440.1 extracellular [4.98] AT4G23400.1 plasma membrane [4.71] AT1G22740.1 vacuole [4.67] AT1G22530.1 cytosol, plasma membrane [4.61] AT2G23560.1 plasma membrane [4.59]	AT1G01910.1 cytosol AT1G22300.1 cytosol AT1G35720.1 cytosol AT4G09000.1 cytosol AT2G44350.1 mitochondrion AT3G27240.1 mitochondrion AT4G35830.1 cytosol, mitochondrion AT3G11630.1 plastid

Description (TAIR10)

protein_coding : GAST1 protein homolog 1

Curator
Summary (TAIR10)

GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data

Computational
Description (TAIR10)

GAST1 protein homolog 1 (GASA1); CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1); Has 473 Blast hits to 473 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Protein Annotations

BioGrid:29127	eggNOG:ENOG410J4WV	eggNOG:ENOG410YWQ9	EMBL:AC006434
EMBL:AF462801	EMBL:CP002684	EMBL:U11766	EMBL:Z29940
EnsemblPlants:AT1G75750	EnsemblPlants:AT1G75750.1	entrez:843908	ExpressionAtlas:P46689
GeneID:843908	Genevisible:P46689	GO:GO:0005576	GO:GO:0005618
GO:GO:0009505	GO:GO:0009737	GO:GO:0009739	GO:GO:0009740
GO:GO:0009741	GO:GO:0009826	hmmpanther:PTHR23201	hmmpanther:PTHR23201:SF2
HOGENOM:HOG000240234	InParanoid:P46689	IntAct:P46689	InterPro:IPR003854
OMA:CGSACVA	PaxDb:P46689	Pfam:P46689	Pfam:PF02704
PhylomeDB:P46689	PIR:A96787	PIR:S60229	PRIDE:P46689
PRO:PR:P46689	ProteinModelPortal:P46689	Proteomes:UP000006548	RefSeq:NP_565116.1
STRING:3702.AT1G75750.1	TAIR:AT1G75750	tair10-symbols:GASA1	UniGene:At.24501
UniProt:P46689

Coordinates (TAIR10)

chr1:-:28441813..28442284

Molecular Weight (calculated)

10745.30 Da

IEP (calculated)

9.28

GRAVY (calculated)

-0.16

Length

98 amino acids

Sequence (TAIR10)
(BLAST)

1: MAISKALIAS LLISLLVLQL VQADVENSQK KNGYAKKIDC GSACVARCRL SRRPRLCHRA CGTCCYRCNC VPPGTYGNYD KCQCYASLTT HGGRRKCP