suba logo
AT3G26210.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 23
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 23 (CYP71B23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71 subfamily B, polypeptide 7 (TAIR:AT1G13110.1); Has 33413 Blast hits to 33146 proteins in 1707 species: Archae - 46; Bacteria - 3254; Metazoa - 12207; Fungi - 7086; Plants - 9648; Viruses - 3; Other Eukaryotes - 1169 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G26210-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AB024038EMBL:BT015161EMBL:CP002686EnsemblPlants:AT3G26210
EnsemblPlants:AT3G26210.1entrez:822222Gene3D:1.10.630.10GeneID:822222
Genevisible:Q9LTM0GO:GO:0005506GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0044550GO:GO:0098542
Gramene:AT3G26210.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144HOGENOM:HOG000218629
InParanoid:Q9LTM0InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT3G26210OMA:PREAMAKPaxDb:Q9LTM0Pfam:PF00067
Pfam:Q9LTM0PhylomeDB:Q9LTM0PRIDE:Q9LTM0PRINTS:PR00385
PRINTS:PR00463PRO:PR:Q9LTM0PROSITE:PS00086ProteinModelPortal:Q9LTM0
Proteomes:UP000006548RefSeq:NP_189252.1scanprosite:PS00086SMR:Q9LTM0
STRING:3702.AT3G26210.1SUPFAM:SSF48264TAIR:AT3G26210tair10-symbols:CYP71B23
TMHMM:TMhelixUniGene:At.37251UniGene:At.74945UniProt:Q9LTM0
Coordinates (TAIR10) chr3:-:9593329..9595202
Molecular Weight (calculated) 56926.50 Da
IEP (calculated) 6.72
GRAVY (calculated) -0.09
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MSIFLCFLLL LLLLLVTIIF TRKSQSSKLK LPPGPPKLPI IGNLHYLNGL PHKCLLNLWK IHGPVMQLQL GYVPLVVISS NQAAEEVLKT HDLDCCSRPE
101: TIASKTISYN FKDIGFAPYG EEWRALRKLA VIELFSLKKF NSFRYIREEE NDLLVKKLSE ASEKQSPVNL KKALFTLSAS IVCRLAFGQN LHESEFIDED
201: SMEDLASRSE KIQAKFAFSN FFPGGWILDK ITGQSKSLNE IFADLDGFFN QVLDDHLKPG RKVLETPDVV DVMIDMMNKQ SQDGSFKLTT DHIKGIISDI
301: FLAGVNTSAT TILWAMTELI RNPRVMKKVQ DEVRTVLGEK RDRITEQDLN QLNYFKLVIK ETFRLHPAAP LLLPREAMAK IKIQGYDIPE KTQIMVNVYA
401: IGRDPDLWEN PEEFKPERFV DSSVDYRGLN FELLPFGSGR RICPGMTMGI ATVELGLLNL LYFFDWGLPE GRTVKDIDLE EEGAIIIGKK VSLELVPTRR
501: Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)