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AT1G63350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.916
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (CC-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG4658EMBL:AC022355EMBL:CP002684
EnsemblPlants:AT1G63350EnsemblPlants:AT1G63350.1entrez:842641Gene3D:3.40.50.300
Gene3D:3.80.10.10GeneID:842641Genevisible:Q9C8T9GO:GO:0005524
GO:GO:0006952GO:GO:0043531Gramene:AT1G63350.1hmmpanther:PTHR23155
hmmpanther:PTHR23155:SF639HOGENOM:HOG000238348InParanoid:Q9C8T9InterPro:IPR001611
InterPro:IPR002182InterPro:IPR027417InterPro:IPR032675iPTMnet:Q9C8T9
KEGG:ath:AT1G63350ncoils:CoilOMA:EYWICEEPaxDb:Q9C8T9
Pfam:PF00931Pfam:PF13855Pfam:Q9C8T9PhylomeDB:Q9C8T9
PIR:E96659PRIDE:Q9C8T9PRO:PR:Q9C8T9ProteinModelPortal:Q9C8T9
Proteomes:UP000006548RefSeq:NP_176524.1SMR:Q9C8T9STRING:3702.AT1G63350.1
SUPFAM:SSF52058SUPFAM:SSF52540TAIR:AT1G63350UniGene:At.66084
UniProt:Q9C8T9
Coordinates (TAIR10) chr1:-:23494935..23497631
Molecular Weight (calculated) 102633.00 Da
IEP (calculated) 6.75
GRAVY (calculated) -0.18
Length 898 amino acids
Sequence (TAIR10)
(BLAST)
001: MGISFSIPFD PCVNKVSQWL DMKVSYTHNL EKNLVALETT MEELKAKRDD LLRKLKREED RGLQTLGEIK VWLNRVETIE SRVNDLLNAR NAELQRLCLC
101: GFCSKSLTTS YRYGKSVFLK LREVEKLERR VFEVISDQAS TSEVEEQQLQ PTIVGQETML DNAWNHLMED GVGIMGLYGM GGVGKTTLLT QINNKFSKYM
201: CGFDSVIWVV VSKEVNVENI LDEIAQKVHI SGEKWDTKYK YQKGVYLYNF LRKMRFVLFL DDIWEKVNLV EIGVPFPTIK NKCKVVFTTR SLDVCTSMGV
301: EKPMEVQCLA DNDAYDLFQK KVGQITLGSD PEIRELSRVV AKKCCGLPLA LNVVSETMSC KRTVQEWRHA IYVLNSYAAK FSGMDDKILP LLKYSYDSLK
401: GEDVKMCLLY CALFPEDAKI RKENLIEYWI CEEIIDGSEG IDKAENQGYE IIGSLVRASL LMEEVELDGA NIVCLHDVVR EMALWIASDL GKQNEAFIVR
501: ASVGLREILK VENWNVVRRM SLMKNNIAHL DGRLDCMELT TLLLQSTHLE KISSEFFNSM PKLAVLDLSG NYYLSELPNG ISELVSLQYL NLSSTGIRHL
601: PKGLQELKKL IHLYLERTSQ LGSMVGISCL HNLKVLKLSG SSYAWDLDTV KELEALEHLE VLTTTIDDCT LGTDQFLSSH RLMSCIRFLK ISNNSNRNRN
701: SSRISLPVTM DRLQEFTIEH CHTSEIKMGR ICSFSSLIEV NLSNCRRLRE LTFLMFAPNL KRLHVVSSNQ LEDIINKEKA HDGEKSGIVP FPKLNELHLY
801: NLRELKNIYW SPLPFPCLEK INVMGCPNLK KLPLDSKSGK HGGNGLIITH REMEWITRVE WEDEATKTRF LANRSSFSSS LICFSNDLVS RDMNCFHL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)