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AT1G63360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.932
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (CC-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 17830 Blast hits to 15790 proteins in 633 species: Archae - 28; Bacteria - 1230; Metazoa - 2561; Fungi - 201; Plants - 13411; Viruses - 6; Other Eukaryotes - 393 (source: NCBI BLink).
Protein Annotations
BioGrid:27863eggNOG:COG4886eggNOG:KOG4658EMBL:AC008047
EMBL:AC022355EMBL:CP002684EnsemblPlants:AT1G63360EnsemblPlants:AT1G63360.1
entrez:842642Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:842642
Genevisible:Q9SH22GO:GO:0005524GO:GO:0006952GO:GO:0043531
Gramene:AT1G63360.1hmmpanther:PTHR23155hmmpanther:PTHR23155:SF639HOGENOM:HOG000238348
InParanoid:Q9SH22InterPro:IPR001611InterPro:IPR002182InterPro:IPR027417
InterPro:IPR032675iPTMnet:Q9SH22KEGG:ath:AT1G63360ncoils:Coil
OMA:EINIRECPaxDb:Q9SH22Pfam:PF00931Pfam:PF13855
Pfam:Q9SH22PhylomeDB:Q9SH22PIR:F96659PRIDE:Q9SH22
PRO:PR:Q9SH22ProteinModelPortal:Q9SH22Proteomes:UP000006548RefSeq:NP_176525.1
SMR:Q9SH22STRING:3702.AT1G63360.1SUPFAM:SSF52058SUPFAM:SSF52540
TAIR:AT1G63360UniGene:At.66085UniProt:Q9SH22
Coordinates (TAIR10) chr1:-:23499515..23502169
Molecular Weight (calculated) 101084.00 Da
IEP (calculated) 7.21
GRAVY (calculated) -0.20
Length 884 amino acids
Sequence (TAIR10)
(BLAST)
001: MGISFSIPFD PCVNKVSQWL DMKVSYTHNL EKNLAALEKT MKELKAKRDD LERRLKREEA RGLQRLSEFQ VWLDSVATVE DIIITLLRDR NVEIQRLCLC
101: RFCSKSLTRS YRYGKSVFLR LREVEKLKGE VFGVITEQAS TSAFEERPLQ PTIVGQDTML DKAGKHLMED GVGIMGMYGM GGVGKTTLLT QLYNMFNKDK
201: CGFDIGIWVV VSQEFHVEKV QDEIAQKLGL GGDEWTQKDK SQKGICLYNI LREKSFVLFL DDIWEKVDLA EIGVPDPRTK KGRKLAFTTR SQEVCARMGV
301: EHPMEVQCLE ENVAFDLFQK KVGQTTLGSD PGIPQLARIV AKKCCGLPLA LNVIGETMSC KRTIQEWRHA IHVLNSYAAE FIGMEDKVLP LLKYSYDNLK
401: GEQVKSSLLY CALYPEDAKI LKEDLIEHWI CEEIIDGSEG IEKAEDKGYE IIGCLVRASL LMEWDDGDGR RAVCMHDVVR EMALWIASEL GIQKEAFIVR
501: AGVGVREIPK IKNWNVVRRM SLMENKIHHL VGSYECMELT TLLLGKREYG SIRSQLKTIS SEFFNCMPKL AVLDLSHNKS LFELPEEISN LVSLKYLNLL
601: YTEISHLPKG IQELKKIIHL NLEYTRKLES ITGISSLHNL KVLKLFRSRL PWDLNTVKEL ETLEHLEILT TTIDPRAKQF LSSHRLLSHS RLLEIYGSSV
701: SSLNRHLESL SVSTDKLREF QIKSCSISEI KMGGICNFLS LVDVNIFNCE GLRELTFLIF APKIRSLSVW HAKDLEDIIN EEKACEGEES GILPFPELNF
801: LTLHDLPKLK KIYWRPLPFL CLEEINIREC PNLRKLPLDS TSGKQGENGC IIRNKDSRWF EGVKWADEAT KKRFLPSCQL ISLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)