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AT3G26180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.871
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 20
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 20 (CYP71B20); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 19 (TAIR:AT3G26170.1); Has 32920 Blast hits to 32663 proteins in 1663 species: Archae - 46; Bacteria - 3164; Metazoa - 12063; Fungi - 6912; Plants - 9553; Viruses - 3; Other Eukaryotes - 1179 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G26180-MONOMERBioCyc:ARA:GQT-1956-MONOMEREC:1.14.-.-eggNOG:COG2124
eggNOG:KOG0156EMBL:AB024038EMBL:AY056270EMBL:AY143938
EMBL:CP002686EnsemblPlants:AT3G26180EnsemblPlants:AT3G26180.1entrez:822219
ExpressionAtlas:Q9LTM3Gene3D:1.10.630.10GeneID:822219Genevisible:Q9LTM3
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709
GO:GO:0020037GO:GO:0044550GO:GO:0098542hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF144HOGENOM:HOG000218629InParanoid:Q9LTM3InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT3G26180OMA:HESNFID
PaxDb:Q9LTM3Pfam:PF00067Pfam:Q9LTM3PhylomeDB:Q9LTM3
PRIDE:Q9LTM3PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9LTM3
PROSITE:PS00086ProteinModelPortal:Q9LTM3Proteomes:UP000006548RefSeq:NP_189249.1
scanprosite:PS00086SMR:Q9LTM3STRING:3702.AT3G26180.1SUPFAM:SSF48264
TAIR:AT3G26180tair10-symbols:CYP71B20TMHMM:TMhelixUniGene:At.25393
UniGene:At.48705UniProt:Q9LTM3
Coordinates (TAIR10) chr3:-:9578407..9579993
Molecular Weight (calculated) 57419.10 Da
IEP (calculated) 7.83
GRAVY (calculated) -0.10
Length 502 amino acids
Sequence (TAIR10)
(BLAST)
001: MAISFLCFCL ITLASLIFFA KKIKHLKWNL PPSPPKFPVI GNLHQIGELP HRSLQHLAER YGPVMLLHFG FVPVTVVSSR EAAEEVLRTH DLDCCSRPKL
101: VGTRLLSRNF KDVCFTPYGN EWKARRKFAL RELFCLKKVQ SFRHIREEEC NFLVKQLSES AVNRSPVDLS KSLFWLTASI FFRVALGQNF HESNFIDKEK
201: IEELVFEAET ALASFTCSDF FPVAGLGWLV DWFSGQHKRL NDVFYKLDAL FQHVIDDHLN PGRSKEHEDI IDSMLDAIHK EGKDSSLELI IDHIKGFLAN
301: IFLAGIDTGA LTMIWAMTEL VKNPKLIKKV QGEIREQLGS NKARITEEDI DKVPYLKMVI KETFRLHPAA PLILPRETMA HIKVQGYDIP PKRRILVNVS
401: AIGRDPKLWT NPEEFDPERF MDSSVDYRGQ HYELLPFGSG RRICPGMPMG IAAVELGLLN LLYFFDWKLP DGMTHKDIDT EEAGTLTIVK KVPLQLVPVR
501: VQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)