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AT2G31880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:30875866 (2019): plasma membrane
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15574830 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity.
Computational
Description (TAIR10)
SUPPRESSOR OF BIR1 1 (SOBIR1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, positive regulation of defense response, negative regulation of floral organ abscission, positive regulation of cell death; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 176453 Blast hits to 132218 proteins in 4789 species: Archae - 165; Bacteria - 16198; Metazoa - 50399; Fungi - 11231; Plants - 77353; Viruses - 425; Other Eukaryotes - 20682 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G31880-MONOMERBioGrid:3093EC:2.7.10.1EC:2.7.11.1
eggNOG:COG0515eggNOG:ENOG410IH4CEMBL:AC006533EMBL:AF370596
EMBL:AY058153EMBL:CP002685EMBL:FJ708707EnsemblPlants:AT2G31880
EnsemblPlants:AT2G31880.1entrez:817746Gene3D:3.80.10.10GeneID:817746
Genevisible:Q9SKB2GO:GO:0004674GO:GO:0004713GO:GO:0004714
GO:GO:0005524GO:GO:0005886GO:GO:0006952GO:GO:0010942
GO:GO:0016021GO:GO:0018108GO:GO:0031349Gramene:AT2G31880.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF9HOGENOM:HOG000071072InParanoid:Q9SKB2
InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009
InterPro:IPR032675KEGG:ath:AT2G31880OMA:QHTDEMSPaxDb:Q9SKB2
Pfam:PF00069Pfam:PF13855Pfam:Q9SKB2Pfscan:PS50011
Pfscan:PS51450PhylomeDB:Q9SKB2PIR:C84726PRIDE:Q9SKB2
PRO:PR:Q9SKB2PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450
ProteinModelPortal:Q9SKB2Proteomes:UP000006548RefSeq:NP_180747.1scanprosite:PS00108
SMART:SM00220SMR:Q9SKB2STRING:3702.AT2G31880.1SUPFAM:SSF52058
SUPFAM:SSF56112SwissPalm:Q9SKB2TAIR:AT2G31880tair10-symbols:EVR
tair10-symbols:SOBIR1TMHMM:TMhelixUniGene:At.13945UniGene:At.75587
UniProt:Q9SKB2
Coordinates (TAIR10) chr2:+:13554920..13556845
Molecular Weight (calculated) 71115.50 Da
IEP (calculated) 9.61
GRAVY (calculated) -0.16
Length 641 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVPTGSANL FLRPLILAVL SFLLLSSFVS SVEWLDIDSS DLKALQVIET ELGVNSQRSS ASDVNPCGRR GVFCERRHSA TTGEYVLRVT RLVYRSRSLT
101: GTISPVIGML SELKELTLSN NQLVNAVPVD ILSCKQLEVL DLRKNRFSGQ IPGNFSSLSR LRILDLSSNK LSGNLNFLKN LRNLENLSVA NNLFSGKIPE
201: QIVSFHNLRF FDFSGNRYLE GPAPVMSSIK LQTSPHQTRH ILAETPTSSP TNKPNNSTTS KAPKGAPKPG KLKKKKKKSK KKKVAAWILG FVVGAIGGTI
301: SGFVFSVLFK LIIQAIRGSE KPPGPSIFSP LIKKAEDLAF LENEEALASL EIIGRGGCGE VFKAELPGSN GKIIAVKKVI QPPKDADELT DEDSKFLNKK
401: MRQIRSEINT VGHIRHRNLL PLLAHVSRPE CHYLVYEYME KGSLQDILTD VQAGNQELMW PARHKIALGI AAGLEYLHMD HNPRIIHRDL KPANVLLDDD
501: MEARISDFGL AKAMPDAVTH ITTSHVAGTV GYIAPEFYQT HKFTDKCDIY SFGVILGILV IGKLPSDEFF QHTDEMSLIK WMRNIITSEN PSLAIDPKLM
601: DQGFDEQMLL VLKIACYCTL DDPKQRPNSK DVRTMLSQIK H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)