AT2G33580.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT2G23770.1); Has 102109 Blast hits to 101070 proteins in 4036 species: Archae - 73; Bacteria - 10993; Metazoa - 38718; Fungi - 7726; Plants - 30221; Viruses - 349; Other Eukaryotes - 14029 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:14219848..14221842 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 72573.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.84 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 664 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAACTLHALS VTLFLLLFFA VSPAKAQQPY VNNHQLACEV RVYDNITNGF TCNGPPSCRS YLTFWSQPPY NTADSIAKLL NVSAAEIQSI NNLPTATTRI 101: PTRELVVIPA NCSCSSSSGG FYQHNATYNL SGNRGDETYF SVANDTYQAL STCQAMMSQN RYGERQLTPG LNLLVPLRCA CPTAKQTTAG FKYLLTYLVA 201: MGDSISGIAE MFNSTSAAIT EGNELTSDNI FFFTPVLVPL TTEPTKIVIS PSPPPPPVVA TPPQTPVDPP GSSSSHKWIY IGIGIGAGLL LLLSILALCF 301: YKRRSKKKSL PSSLPEENKL FDSSTKQSIP TTTTTQWSID LSNSSEAFGL KSAIESLTLY RFNDLQSATS NFSDENRIKG SVYRATINGD DAAVKVIKGD 401: VSSSEINLLK KLNHSNIIRL SGFCIREGTS YLVFEYSENG SISDWLHSSG KKSLTWKQRV EIARDVAEAL DYLHNYITPP HIHKNLESTN ILLDSNFRAK 501: IANFGVARIL DEGDLDLQLT RHVEGTQGYL APEYVENGVI TSKLDVFAFG VAVLELLSGR EAVTIHKKKE GEEEVEMLCK VINSVLGGEN VREKLKEFMD 601: PSLGNEYPLE LAYTMAQLAK SCVATDLNSR PSVTQVLTTL SMIVSSSIDW EPSDDLLRSG SLGN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)