AT2G40270.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 40621 Blast hits to 40281 proteins in 1597 species: Archae - 8; Bacteria - 2197; Metazoa - 11172; Fungi - 1041; Plants - 22757; Viruses - 129; Other Eukaryotes - 3317 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:16822136..16824327 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 54178.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 489 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MLFKMRSFVA FVLLLSWFGS CCSLKDQAVD FLKSEDSLKK DLSSDEDSTY LKAFGFHRKT LVRNPYKDLP SRKDRKNRVV AATTTPSSSP EPAPKHVSTK 101: ASTVSEPQKR SSTQDVSPSP SAPLANSPIP RNSHSSVPLV VGCVGGAFFL LLVATGLYFF TSKAGKTVNP WRTGLSGQLQ KVFVTGIPVL KRSEIEAACE 201: DFSNVIGSCP IGKLFKGTLS SGVEIAVASF ATTTAKDWKD STEIHFRKKI EMLSKINHKN FANLLGYCEE KEPFTRILIF EYAPNGSLFE HLHYKESEHL 301: DWGMRLRIAM GLAYCLDHMH QLNPPIAHTN LVSSSLQLTE DYAVKVSDFS FGSSETETNI NNNTVIDTHI SALNPEDNIY SFGLLLFEMI TGKLIESVNK 401: PDSVDSSLVD FLRGETLAKM VDPTLESYDA KIENIGEVIK SCLRTDPKER PTMQEVTGWL REITGLSPND ATPKLSPLWW AELEVLSTA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)