AT1G62170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.981 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Serine protease inhibitor (SERPIN) family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Serine protease inhibitor (SERPIN) family protein; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: serpin 2 (TAIR:AT2G14540.1); Has 6160 Blast hits to 6124 proteins in 462 species: Archae - 64; Bacteria - 366; Metazoa - 4705; Fungi - 11; Plants - 344; Viruses - 456; Other Eukaryotes - 214 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22973876..22975463 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48176.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.61 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||||||
| Length | 433 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPKEKKQKL DTSEVASPSL SKTHLKKKKT KKQKIRKSQE ITSPSLSKNT DLVIASPSLS NIDVGEAMKK QNDVAIFLTG IVISSVAKNS NFVFSPASIN 101: AALTMVAASS GGEQGEELRS FILSFLKSSS TDELNAIFRE IASVVLVDGS KKGGPKIAVV NGMWMDQSLS VNPLSKDLFK NFFSAAFAQV DFRSKAEEVR 201: TEVNAWASSH TNGLIKDLLP RGSVTSLTDR VYGSALYFKG TWEEKYSKSM TKCKPFYLLN GTSVSVPFMS SFEKQYIAAY DGFKVLRLPY RQGRDNTNRN 301: FAMYIYLPDK KGELDDLLER MTSTPGFLDS HNPERRVKVG KFRIPKFKIE FGFEASSAFS DFELDVSFYQ KTLIEIDEKG TEAVTFTAFR SAYLGCALVK 401: PIDFVADHPF LFLIREEQTG TVLFAGQIFD PSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)