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AT5G35790.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30865669 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glucose-6-phosphate dehydrogenase 1
Curator
Summary (TAIR10)
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.
Computational
Description (TAIR10)
glucose-6-phosphate dehydrogenase 1 (G6PD1); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity, protein binding; INVOLVED IN: pentose-phosphate shunt, oxidative branch, glucose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:18812BRENDA:1.1.1.49EC:1.1.1.49eggNOG:COG0364
eggNOG:KOG0563EMBL:AB005236EMBL:AJ001359EMBL:AY086213
EMBL:AY099561EMBL:BT002133EMBL:CP002688EMBL:X84230
EnsemblPlants:AT5G35790EnsemblPlants:AT5G35790.1entrez:833559Gene3D:3.40.50.720
GeneID:833559Genevisible:Q43727GO:GO:0004345GO:GO:0006006
GO:GO:0009051GO:GO:0009507GO:GO:0009570GO:GO:0050661
Gramene:AT5G35790.1gramene_pathway:1.1.1.49gramene_pathway:OXIDATIVEPENT-PWYHAMAP:MF_00966
hmmpanther:PTHR23429hmmpanther:PTHR23429:SF1HOGENOM:HOG000046192InParanoid:Q43727
IntAct:Q43727InterPro:IPR001282InterPro:IPR016040InterPro:IPR019796
InterPro:IPR022674InterPro:IPR022675iPTMnet:Q43727KEGG:00030+1.1.1.49
KEGG:00480+1.1.1.49KEGG:ath:AT5G35790KO:K00036OMA:TTLTCRI
PANTHER:PTHR23429PaxDb:Q43727Pfam:PF00479Pfam:PF02781
Pfam:Q43727PhylomeDB:Q43727PIRSF:PIRSF000110PRIDE:Q43727
PRINTS:PR00079PRO:PR:Q43727PROSITE:PS00069ProteinModelPortal:Q43727
Proteomes:UP000006548RefSeq:NP_198428.1scanprosite:PS00069SMR:Q43727
STRING:3702.AT5G35790.1SUPFAM:SSF51735SUPFAM:SSF55347TAIR:AT5G35790
tair10-symbols:G6PD1TIGRfam:TIGR00871TIGRFAMs:TIGR00871UniGene:At.60
UniPathway:UPA00115UniProt:Q43727
Coordinates (TAIR10) chr5:-:13956879..13959686
Molecular Weight (calculated) 65431.10 Da
IEP (calculated) 7.83
GRAVY (calculated) -0.39
Length 576 amino acids
Sequence (TAIR10)
(BLAST)
001: MATHSMIIPS PSSSSSSLAT AASPFKETLP LFSRSLTFPR KSLFSQVRLR FFAEKHSQLD TSNGCATNFA SLQDSGDQLT EEHVTKGEST LSITVVGASG
101: DLAKKKIFPA LFALFYEGCL PQDFSVFGYA RTKLTHEELR DMISSTLTCR IDQREKCGDK MEQFLKRCFY HSGQYNSEED FAELNKKLKE KEAGKISNRL
201: YYLSIPPNIF VDVVRCASLR ASSENGWTRV IVEKPFGRDS ESSGELTRCL KQYLTEEQIF RIDHYLGKEL VENLSVLRFS NLVFEPLWSR NYIRNVQLIF
301: SEDFGTEGRG GYFDQYGIIR DIMQNHLLQI LALFAMETPV SLDAEDIRSE KVKVLRSMKP LRLEDVVVGQ YKGHNKGGKT YPGYTDDPTV PNHSLTPTFA
401: AAAMFINNAR WDGVPFLMKA GKALHTRGAE IRVQFRHVPG NLYKKSFATN LDNATNELVI RVQPDEGIYL RINNKVPGLG MRLDRSDLNL LYRSRYPREI
501: PDAYERLLLD AIEGERRLFI RSDELDAAWD LFTPALKELE EKKIIPELYP YGSRGPVGAH YLASKYNVRW GDLGEA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)