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AT4G37520.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1); Has 4636 Blast hits to 4606 proteins in 315 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 258; Plants - 4294; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37520-MONOMERBioCyc:ARA:GQT-869-MONOMERBioGrid:15188EC:1.11.1.7
eggNOG:ENOG410IJ72eggNOG:ENOG4111FDSEMBL:AF083762EMBL:AJ006960
EMBL:AL035601EMBL:AL035605EMBL:AL161591EMBL:AY062816
EMBL:AY081577EMBL:AY086567EMBL:CP002687EMBL:X98314
EMBL:X98856EnsemblPlants:AT4G37520EnsemblPlants:AT4G37520.1entrez:829907
ExpressionAtlas:Q43731GeneID:829907Genevisible:Q43731GO:GO:0004601
GO:GO:0005576GO:GO:0005737GO:GO:0006979GO:GO:0020037
GO:GO:0042744GO:GO:0046872GO:GO:0048511hmmpanther:PTHR31517
hmmpanther:PTHR31517:SF3HOGENOM:HOG000237556InParanoid:Q43731IntAct:Q43731
InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255InterPro:IPR019793
iPTMnet:Q43731KEGG:00940+1.11.1.7OMA:NSMIKLGPaxDb:Q43731
PeroxiBase:216Pfam:PF00141Pfam:Q43731Pfscan:PS50873
PhylomeDB:Q43731PIR:T04709PRIDE:Q43731PRINTS:PR00458
PRINTS:PR00461PRO:PR:Q43731PROSITE:PS00435PROSITE:PS50873
ProteinModelPortal:Q43731Proteomes:UP000006548RefSeq:NP_195468.1scanprosite:PS00435
SMR:Q43731STRING:3702.AT4G37520.1SUPFAM:SSF48113TAIR:AT4G37520
UniGene:At.22541UniProt:Q43731
Coordinates (TAIR10) chr4:+:17631704..17633060
Molecular Weight (calculated) 36078.20 Da
IEP (calculated) 8.78
GRAVY (calculated) -0.22
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVVNKTNLL LLLLSLCLTL DLSSAQLRRN FYAGSCPNVE QIVRNAVQKK VQQTFTTIPA TLRLYFHDCF VNGCDASVMI ASTNNNKAEK DHEENLSLAG
101: DGFDTVIKAK EALDAVPNCR NKVSCADILT MATRDVVNLA GGPQYDVELG RLDGLSSTAA SVGGKLPHPT DDVNKLTSLF AKNGLSLNDM IALSGAHTLG
201: FAHCTKVFNR IYTFNKTTKV DPTVNKDYVT ELKASCPRNI DPRVAINMDP TTPRQFDNVY YKNLQQGKGL FTSDQVLFTD RRSKPTVDLW ANNGQLFNQA
301: FINSMIKLGR VGVKTGSNGN IRRDCGAFN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)