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AT3G10320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.974
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glycosyltransferase family 61 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT2G41640.1); Has 587 Blast hits to 587 proteins in 93 species: Archae - 2; Bacteria - 22; Metazoa - 130; Fungi - 6; Plants - 392; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
CAZy:GT61eggNOG:ENOG410ZHQAeggNOG:KOG4698EMBL:AC009400
EMBL:AK228390EMBL:BT005786EMBL:BT006103EMBL:CP002686
EMBL:KJ138832EnsemblPlants:AT3G10320EnsemblPlants:AT3G10320.1entrez:820194
GeneID:820194GO:GO:0005794GO:GO:0016021GO:GO:0047517
GO:GO:0048354Gramene:AT3G10320.1hmmpanther:PTHR20961hmmpanther:PTHR20961:SF12
HOGENOM:HOG000237443InterPro:IPR007657KEGG:ath:AT3G10320OMA:PEGKSIR
Pfam:PF04577PhylomeDB:Q9SS43Proteomes:UP000006548RefSeq:NP_187643.1
STRING:3702.AT3G10320.1TAIR:AT3G10320TMHMM:TMhelixUniGene:At.27684
UniGene:At.67737UniProt:Q9SS43
Coordinates (TAIR10) chr3:-:3195441..3197111
Molecular Weight (calculated) 57290.50 Da
IEP (calculated) 9.91
GRAVY (calculated) -0.43
Length 494 amino acids
Sequence (TAIR10)
(BLAST)
001: MRQNLKKVAQ IKVDESKKLF PYVFRVKTSC GNCAKRSKPK LIYLLIFSLI SSCFVFAPQL LCFPYPSALF LIDSSIKEIE NRVSESNIES PKTSQKEESI
101: SCDRTGYRSD ICFMKGDIRT HSPSSSIFLY TSNDLTTDQV LQEKIKPYTR KWETSIMETI PELKLVTKDM KLFGDKRKCE VIHEVPAVLF STGGYTGNLY
201: HEFNDGLIPL YITSKRFNKK VVFVIAEYHK WWEMKYGDVL SQLSDYSLID FNKDKRTHCF KEAIVGLRIH GELTVDPSQM QDDGTTINEF RNVLDRAYRP
301: RINRLDRLEE QRFHARLAQR RKAKRPKLAL FSRTGSRGIT NEDLMVKMAQ RIGFDIEVLR PDRTTELAKI YRVLNSSKVM VGVHGAAMTH FLFMKPGSIF
401: IQIIPLGTDW AAETYYGEPA KKLGLDYNGY KILPRESSLY EKYDKDDPIL KDPNSITKKG WQFTKGIYLN DQKVRLDLHR FKKLLIDAYA KSIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)