AT3G57380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.821 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyltransferase family 61 protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT2G41640.1); Has 645 Blast hits to 645 proteins in 97 species: Archae - 0; Bacteria - 36; Metazoa - 169; Fungi - 16; Plants - 385; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21230002..21231672 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 57335.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.42 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||
| Length | 504 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVQYKRLIKK GEKHRLSVEE GGSGASAVTV SGGVYSKTAK QKLLLTIFLS LLSCCYIFSF SSFSLLGAFS RESKGFGPYE LFIAPLCSGT SNGTICCDRT 101: GSRSDVCIMK GDVRTHSASS SVFLFTSLKN KTKITKKIKP YTRKWETSVM QTVQELNLVY RDEENNSLVV SSVNDICDVF YNVPAVFFST GGYTGNVYHE 201: FNDGIIPLFI TSHHFNKKVV FVIVEYHSWW IMKYGDIVSQ LSDYPPVDFN GDKRTHCFKE AIVGLKIHDE LTVESSLMLG NKTILDFRNV LDQAYWPRIH 301: GLIQEEELKA ANKTEDGFKK PILVILSRNG SREILNESLL VELAEEIGFI VHVLRPDKTT ELAKIYRCLN SSDVMIGVHG AAMTHLLFLK PKTVFIQIIP 401: IGTEWAAETY YGKPAKKMRL KYIGYKIKPK ESSLYDEYGI DDPIIRDPKS FTQKGWDYTK KIYLERQNVK LDLKRFRKPL SRAYDFSMKR IGLVYISHKP 501: DVTN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)