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AT2G26290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : root-specific kinase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
root-specific kinase 1 (ARSK1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 108143 Blast hits to 107246 proteins in 3118 species: Archae - 87; Bacteria - 12764; Metazoa - 39296; Fungi - 8859; Plants - 31456; Viruses - 319; Other Eukaryotes - 15362 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26290-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AC004484
EMBL:CP002685EnsemblPlants:AT2G26290EnsemblPlants:AT2G26290.1entrez:817169
Gene3D:2.60.120.200GeneID:817169GO:GO:0004672GO:GO:0005524
GO:GO:0016301Gramene:AT2G26290.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF15
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
KEGG:ath:AT2G26290OMA:NERNQGYPfam:PF00069Pfam:PF07714
Pfscan:PS50011PhylomeDB:O64842PIR:F84658PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_180197.1scanprosite:PS00108
SMR:O64842STRING:3702.AT2G26290.1SUPFAM:SSF56112TAIR:AT2G26290
tair10-symbols:ARSK1UniGene:At.38917UniProt:O64842
Coordinates (TAIR10) chr2:-:11192237..11194259
Molecular Weight (calculated) 48089.20 Da
IEP (calculated) 10.03
GRAVY (calculated) -0.46
Length 424 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVFKKKKTS LTSLFLGCYK AKNASKYEGG EKAVMKIRTC PAFKRLSLSD ISDPSSPMSV MDDLSHSFTS QKLRLFTLSE LRVITHNFSR SNMLGEGGFG
101: PVYKGFIDDK VKPGIEAQPV AVKALDLHGH QGHREWLAEI LFLGQLSNKH LVKLIGFCCE EEQRVLVYEY MPRGSLENQL FRRNSLAMAW GIRMKIALGA
201: AKGLAFLHEA EKPVIYRDFK TSNILLDSDY NAKLSDFGLA KDGPEGEHTH VTTRVMGTQG YAAPEYIMTG HLTTMNDVYS FGVVLLELIT GKRSMDNTRT
301: RREQSLVEWA RPMLRDQRKL ERIIDPRLAN QHKTEAAQVA ASLAYKCLSQ HPKYRPTMCE VVKVLESIQE VDIRKHDGNN NKEGKKFVDI NKFRHHRKGK
401: RRVNIAYSDS LVYKESKAKQ NDGI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)