AT5G58350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : with no lysine (K) kinase 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
with no lysine (K) kinase 4 (WNK4); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 5 (TAIR:AT3G51630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:23585505..23587681 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64917.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.86 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 571 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNMNQVAEYV ETDPTGRYGR FAEILGRGAM KTVYKAIDEK LGIEVAWSQV KLKEVLRSSV DLQRLYSEVH LLSTLNHKSI IRFYTSWIDV HNHTLNFITE 101: LFTSGTLRQY KNKYLRIDIR AIKSWARQIL EGLVYLHEHD PPVIHRDLKC DNIFVNGHLG QVKIGDLGLA RMLRDCHSAH SIIGTPEFMA PELYEENYNE 201: LIDVYSFGMC FLEMITSEFP YSECNHPAQI YKKVVGGKLP GAFYRVGDIE AQRFIGKCLV SASKRVSAKE LLQDPFLASD ESWMVYTSGA GNPKPFLNEN 301: EMDTLKLEDD ELRTEMSIAG KLGAEDNKID LEVQIAYDNG LANNVFFPFD IMNDTSIDVA KEMVKELEII DWEPVEIAKM IDGAISSLVS DWKYEEDDET 401: PHDHHRHRTD SFHSSSSHAS SSQASLSNYM ARGLQDWVQD DLHDETYSQS SSHSGSYSNL NYIAVDEYSS QSPVMSRTHN MTRFCPEESS HLQSGQANAY 501: AASSSTNRSL ASDNRTLTRN RSLVDVQRQL LHRSPGEEAR KRRLFKTVGD VETVGFQSPY AVSRKPPSSR R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)