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AT2G24180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : endoplasmic reticulum 16618929
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
TAIR : mitochondrion 15276431
TAIR : endoplasmic reticulum 16618929
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:32219438 (2020): cytosol
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:15276431 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome p450 71b6
Curator
Summary (TAIR10)
cytochrome P450 monooxygenase
Computational
Description (TAIR10)
cytochrome p450 71b6 (CYP71B6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 37 (TAIR:AT3G26330.1); Has 32387 Blast hits to 32166 proteins in 1619 species: Archae - 48; Bacteria - 2986; Metazoa - 11709; Fungi - 7043; Plants - 9512; Viruses - 3; Other Eukaryotes - 1086 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G24180-MONOMERBioGrid:2304EC:1.14.-.-eggNOG:COG2124
eggNOG:KOG0156EMBL:AC005967EMBL:AY054534EMBL:AY064632
EMBL:CP002685EMBL:D78604EnsemblPlants:AT2G24180EnsemblPlants:AT2G24180.1
entrez:816952Gene3D:1.10.630.10GeneID:816952Genevisible:O65787
GO:GO:0004497GO:GO:0005506GO:GO:0005739GO:GO:0005783
GO:GO:0005794GO:GO:0005886GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0042430GO:GO:0044550
Gramene:AT2G24180.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF85HOGENOM:HOG000218629
InParanoid:O65787IntAct:O65787InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT2G24180OMA:WRLHAPSPaxDb:O65787
Pfam:O65787Pfam:PF00067PhylomeDB:O65787PIR:T52172
PRIDE:O65787PRINTS:PR00385PRINTS:PR00463PRO:PR:O65787
PROSITE:PS00086ProteinModelPortal:O65787Proteomes:UP000006548RefSeq:NP_179995.1
scanprosite:PS00086SMR:O65787STRING:3702.AT2G24180.1SUPFAM:SSF48264
TAIR:AT2G24180tair10-symbols:CYP71B6TMHMM:TMhelixUniGene:At.21132
UniGene:At.50668UniProt:O65787
Coordinates (TAIR10) chr2:+:10281890..10283589
Molecular Weight (calculated) 57012.00 Da
IEP (calculated) 7.97
GRAVY (calculated) -0.12
Length 503 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLFSFPIST ELLPWLLLLL IPPLLIFFLL RSPKNLPPGP PRLPILGNIH QLGSLPHRSL RDLSLKYGPV ITVYLGSVRT VVVHSPETAE EVLKLHDSEC
101: CTRPKLSITK SFFYDGLGLG FTKWGDYYRD VRKLCVLELF SVKRANSFRN IREEELSRLV NSFSDSASSG SSVDLTANLA KFVASFTCRM AFGLSFQGSG
201: MDNETFLELF TEANRVIGKF AAADIFPGFG WILDRISGLD SSRRKSFQDL DTFYQKAIVD HREKKKTEDR EDLIDVLLKL QSQETKLGSS RITDTHIRAI
301: IMDLFVAGVD TSVITLDWTM AELSRHPRVM KKVQAEIREH VGDKGIVTYD DLEALVYMKM VIKETWRLHA PSPILIPREA MTNFKIKGYD IYPGTRIHVN
401: AWAIGRNPDV WKDPDEFIPE RFVDSNVETK GTSFELLPFG SGRRGCPAMY VGLSTVEYTL ANLLYHFDWK ATEEVSVEEA PGLTSHRKHP LHLVPVNVIN
501: RKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)