ATCG01000.1::SUBA5

ATCG01000.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plastid 1.000
What is SUBAcon?

Predictors

External Curations

SwissProt : plastid 16381842

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31932409 (2020): plastid PMID:31818904 (2020): mitochondrion PMID:21531424 (2011): plastid	PMID:19452453 (2009): AT5G57380.1:None: PMID:19452453 (2009): AT5G33280.1:None: PMID:19452453 (2009): AT5G66280.1:None: PMID:19452453 (2009): AT5G45050.1:None: PMID:19452453 (2009): AT5G67510.1:None: PMID:19452453 (2009): AT5G37500.1:None: PMID:19452453 (2009): AT5G23860.1:None: PMID:19452453 (2009): AT5G55300.1:None: PMID:19452453 (2009): AT5G56030.1:None: PMID:19452453 (2009): AT5G26860.1:None: PMID:19452453 (2009): AT5G27000.1:None: PMID:19452453 (2009): AT5G23430.1:None: PMID:19452453 (2009): AT5G27100.1:None: PMID:19452453 (2009): AT5G58550.1:None: PMID:19452453 (2009): AT5G52830.1:None: PMID:19452453 (2009): AT3G28200.1:None: PMID:19452453 (2009): AT3G58040.1:None: PMID:19452453 (2009): AT3G16650.1:None: PMID:19452453 (2009): AT3G20330.1:None: PMID:19452453 (2009): AT3G53570.1:None: PMID:19452453 (2009): AT3G25810.1:None: PMID:19452453 (2009): AT3G46710.1:None: PMID:19452453 (2009): AT3G57260.1:None: PMID:19452453 (2009): AT5G05340.1:None: PMID:19452453 (2009): AT5G07090.1:None: PMID:19452453 (2009): AT5G13490.1:None: PMID:19452453 (2009): AT4G39800.1:None: PMID:19452453 (2009): AT5G09810.1:None: PMID:19452453 (2009): AT5G13160.1:None: PMID:19452453 (2009): AT5G02490.1:None: PMID:19452453 (2009): AT5G04870.1:None: PMID:19452453 (2009): AT4G37770.1:None: PMID:19452453 (2009): AT4G39980.1:None: PMID:19452453 (2009): AT5G03940.1:None: PMID:19452453 (2009): AT3G28030.1:None: PMID:19452453 (2009): AT5G04930.1:None: PMID:19452453 (2009): AT4G39400.1:None: PMID:19452453 (2009): AT5G03340.1:None: PMID:19452453 (2009): AT5G04140.1:None: PMID:19452453 (2009): AT5G48400.1:None: PMID:19452453 (2009): AT5G64050.1:None: PMID:19452453 (2009): AT5G49060.1:None: PMID:19452453 (2009): AT5G19280.1:None: PMID:19452453 (2009): AT5G20920.1:None: PMID:19452453 (2009): AT5G49500.1:None: PMID:19452453 (2009): AT5G10450.1:None: PMID:19452453 (2009): AT4G32180.1:None: PMID:19452453 (2009): AT4G26200.1:None: PMID:19452453 (2009): AT4G30935.1:None: PMID:19452453 (2009): AT4G33010.1:None: PMID:19452453 (2009): AT4G37530.1:None: PMID:19452453 (2009): AT4G33510.1:None: PMID:19452453 (2009): AT5G16050.1:None: PMID:19452453 (2009): AT5G38480.1:None: PMID:19452453 (2009): AT1G34760.1:None: PMID:19452453 (2009): AT5G65430.1:None: PMID:19452453 (2009): AT1G35160.1:None: PMID:19452453 (2009): AT4G35090.1:None: PMID:19452453 (2009): AT1G22300.1:None: PMID:19452453 (2009): AT2G42590.1:None: PMID:19452453 (2009): AT4G09000.1:None: PMID:19452453 (2009): ATMG00090.1:None: PMID:19452453 (2009): AT1G53310.1:None: PMID:19452453 (2009): AT5G35790.1:None: PMID:19452453 (2009): ATCG00500.1:None: PMID:19452453 (2009): AT1G32900.1:None: PMID:19452453 (2009): AT1G10760.1:None: PMID:19452453 (2009): AT5G50950.1:None: PMID:19452453 (2009): AT4G02020.1:None: PMID:19452453 (2009): AT3G50000.1:None: PMID:19452453 (2009): AT3G48340.1:None: PMID:19452453 (2009): AT3G14470.1:None: PMID:19452453 (2009): AT3G53760.1:None: PMID:19452453 (2009): AT4G14960.1:None: PMID:19452453 (2009): AT4G02680.1:None: PMID:19452453 (2009): AT4G03080.1:None: PMID:19452453 (2009): AT3G59220.1:None: PMID:19452453 (2009): AT4G04910.1:None: PMID:19452453 (2009): AT4G00360.1:None: PMID:19452453 (2009): AT1G24280.1:None: PMID:19452453 (2009): AT4G14880.1:None: PMID:19452453 (2009): AT3G59760.1:None: PMID:19452453 (2009): AT4G02060.1:None: PMID:19452453 (2009): AT4G00650.1:None: PMID:19452453 (2009): AT4G12020.1:None: PMID:19452453 (2009): AT4G11280.1:None: PMID:19452453 (2009): AT4G34460.1:None: PMID:19452453 (2009): AT4G37520.1:None: PMID:19452453 (2009): AT4G31800.1:None: PMID:19452453 (2009): AT4G33430.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

no coexpression data

AT5G02490.1 cytosol
AT5G23860.1 cytosol
AT5G16050.1 cytosol
AT5G13160.1 cytosol
AT5G10450.1 cytosol
AT5G09810.1 cytosol
AT4G00650.1 cytosol
AT5G07090.1 cytosol
AT5G03340.1 cytosol
AT5G20920.1 cytosol
AT4G39800.1 cytosol
AT4G09000.1 cytosol
AT4G37770.1 cytosol
AT4G14880.1 cytosol
AT4G14960.1 cytosol
AT4G26200.1 cytosol
AT4G32180.1 cytosol
AT3G16650.1 cytosol
AT1G22300.1 cytosol
AT5G67510.1 cytosol
AT5G66280.1 cytosol
AT5G65430.1 cytosol
AT1G35160.1 cytosol
AT1G53310.1 cytosol
AT2G42590.1 cytosol
AT5G58550.1 cytosol
AT5G49500.1 cytosol
AT5G49060.1 cytosol
AT5G38480.1 cytosol
AT3G46710.1 cytosol
AT5G27000.1 cytosol
AT3G50000.1 endoplasmic reticulum
AT4G00360.1 endoplasmic reticulum
AT5G37500.1 endoplasmic reticulum
AT5G05340.1 extracellular
AT4G37520.1 extracellular
AT4G37530.1 extracellular
AT3G57260.1 extracellular
AT3G48340.1 extracellular
AT3G28200.1 extracellular
AT4G04910.1 golgi
AT3G59760.1 mitochondrion
AT5G13490.1 mitochondrion
AT5G26860.1 mitochondrion
AT4G33010.1 mitochondrion
ATMG00090.1 mitochondrion
AT5G50950.1 cytosol, mitochondrion
AT5G45050.1 nucleus
AT3G28030.1 nucleus
AT5G52830.1 nucleus
AT5G55300.1 nucleus
AT5G57380.1 nucleus
AT3G53570.1 nucleus
AT5G23430.1 nucleus
AT3G58040.1 nucleus
AT3G59220.1 nucleus
AT4G30935.1 nucleus
AT4G02060.1 nucleus
AT4G31800.1 nucleus
AT4G12020.1 nucleus
AT4G11280.1 nucleus
AT4G03080.1 nucleus
AT4G02680.1 nucleus
AT4G02020.1 nucleus
AT5G56030.1 cytosol, nucleus
AT4G35090.1 peroxisome
AT3G53760.1 plasma membrane
AT3G14470.1 plasma membrane
AT4G33430.1 plasma membrane
AT5G48400.1 plasma membrane
AT5G04930.1 plasma membrane
AT5G19280.1 plasma membrane
AT4G39400.1 plasma membrane
AT5G27100.1 plasma membrane
AT4G34460.1 endoplasmic reticulum, plasma membrane
AT5G04870.1 peroxisome, plasma membrane
AT3G25810.1 plastid
AT3G20330.1 plastid
AT1G10760.1 plastid
AT4G33510.1 plastid
AT4G39980.1 plastid
AT5G04140.1 plastid
AT5G03940.1 plastid
AT1G32900.1 plastid
AT1G24280.1 plastid
ATCG00500.1 plastid
AT5G35790.1 plastid
AT5G64050.1 mitochondrion, plastid
AT5G33280.1 vacuole
AT1G34760.1 vacuole

Description (TAIR10)

protein_coding : Ycf1 protein

Curator
Summary (TAIR10)

hypothetical protein

Computational
Description (TAIR10)

YCF1.1; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATCG01130.1).

Protein Annotations

EnsemblPlants:ATCG01000	EnsemblPlants:ATCG01000.1	entrez:844706	hmmpanther:PTHR33163
hmmpanther:PTHR33163:SF3	Pfam:PF05758	tair10-symbols:YCF1.1	TMHMM:TMhelix

Coordinates (TAIR10)

chrC:+:109405..110436

Molecular Weight (calculated)

39862.70 Da

IEP (calculated)

9.15

GRAVY (calculated)

0.05

Length

343 amino acids

Sequence (TAIR10)
(BLAST)

001: VMVFQSFILG NLVSLCMKII NSVVVVGLYY GFLTTFSIGP SYLFLLRARV MDEGEEGTEK KVSATTGFIA GQLMMFISIY YAPLHLALGR PHTITVLALP
101: YLLFHFFWNN HKHFFDYGST TRNEMRNLRI QCVFLNNLIF QLFNHFILPS SMLARLVNIY MFRCNNKMLF VTSSFVGWLI GHILFMKWVG LVLVWIQQNN
201: SIRSNVVIRS NKYKFLVSEL RNSMARIFSI LLFITCVYYL GRIPSPIFTK KLKGTSETGG TKQDQEVSTE EAPFPSLFSE EGEDLDKIDE MEEIRVNGKD
301: KINKDDEFHV RTYYNYKTVS ENLYGNKENS NLEFFKIKKK EDH