ATCG01130.1::SUBA5

ATCG01130.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plastid 1.000
What is SUBAcon?

Predictors

External Curations

SwissProt : plastid 16381842
TAIR : plastid 18431481

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31932409 (2020): plastid PMID:31615849 (2019): plastid plastid thylakoid PMID:31520498 (2020): mitochondrion PMID:31023727 (2019): mitochondrion PMID:30962257 (2019): plastid PMID:30865669 (2019): plastid PMID:29967049 (2018): plastid PMID:28865150 (2017): extracellular region plant-type cell wall PMID:27137770 (2016): plastid plastid stroma PMID:25900983 (2015): Golgi trans-Golgi network early endosome PMID:24872594 (2014): plastid plastid envelope plastid inner membrane PMID:24124904 (2013): plastid PMID:23673981 (2013): plastid plastid stroma plastoglobules PMID:22923678 (2012): plastid PMID:22550958 (2012): plastid PMID:21433285 (2011): plasma membrane PMID:20061580 (2010): plastid plastid envelope PMID:19334764 (2009): plasma membrane PMID:18431481 (2008): plastid plastid thylakoid PMID:15028209 (2004): plastid	PMID:19452453 (2009): AT5G57380.1:None: PMID:19452453 (2009): AT5G33280.1:None: PMID:19452453 (2009): AT5G66280.1:None: PMID:19452453 (2009): AT5G45050.1:None: PMID:19452453 (2009): AT5G67510.1:None: PMID:19452453 (2009): AT5G37500.1:None: PMID:19452453 (2009): AT5G23860.1:None: PMID:19452453 (2009): AT5G55300.1:None: PMID:19452453 (2009): AT5G56030.1:None: PMID:19452453 (2009): AT5G26860.1:None: PMID:19452453 (2009): AT5G27000.1:None: PMID:19452453 (2009): AT5G23430.1:None: PMID:19452453 (2009): AT5G27100.1:None: PMID:19452453 (2009): AT5G58550.1:None: PMID:19452453 (2009): AT5G52830.1:None: PMID:19452453 (2009): AT3G28200.1:None: PMID:19452453 (2009): AT3G58040.1:None: PMID:19452453 (2009): AT3G16650.1:None: PMID:19452453 (2009): AT3G20330.1:None: PMID:19452453 (2009): AT3G53570.1:None: PMID:19452453 (2009): AT3G25810.1:None: PMID:19452453 (2009): AT3G46710.1:None: PMID:19452453 (2009): AT3G57260.1:None: PMID:19452453 (2009): AT5G05340.1:None: PMID:19452453 (2009): AT5G07090.1:None: PMID:19452453 (2009): AT5G13490.1:None: PMID:19452453 (2009): AT4G39800.1:None: PMID:19452453 (2009): AT5G09810.1:None: PMID:19452453 (2009): AT5G13160.1:None: PMID:19452453 (2009): AT5G02490.1:None: PMID:19452453 (2009): AT5G04870.1:None: PMID:19452453 (2009): AT4G37770.1:None: PMID:19452453 (2009): AT4G39980.1:None: PMID:19452453 (2009): AT5G03940.1:None: PMID:19452453 (2009): AT3G28030.1:None: PMID:19452453 (2009): AT5G04930.1:None: PMID:19452453 (2009): AT4G39400.1:None: PMID:19452453 (2009): AT5G03340.1:None: PMID:19452453 (2009): AT5G04140.1:None: PMID:19452453 (2009): AT5G48400.1:None: PMID:19452453 (2009): AT5G64050.1:None: PMID:19452453 (2009): AT5G49060.1:None: PMID:19452453 (2009): AT5G19280.1:None: PMID:19452453 (2009): AT5G20920.1:None: PMID:19452453 (2009): AT5G49500.1:None: PMID:19452453 (2009): AT5G10450.1:None: PMID:19452453 (2009): AT4G32180.1:None: PMID:19452453 (2009): AT4G26200.1:None: PMID:19452453 (2009): AT4G30935.1:None: PMID:19452453 (2009): AT4G33010.1:None: PMID:19452453 (2009): AT4G37530.1:None: PMID:19452453 (2009): AT4G33510.1:None: PMID:19452453 (2009): AT5G16050.1:None: PMID:19452453 (2009): AT5G38480.1:None: PMID:19452453 (2009): AT1G34760.1:None: PMID:19452453 (2009): AT5G65430.1:None: PMID:19452453 (2009): AT1G35160.1:None: PMID:19452453 (2009): AT4G35090.1:None: PMID:19452453 (2009): AT1G22300.1:None: PMID:19452453 (2009): AT2G42590.1:None: PMID:19452453 (2009): AT4G09000.1:None: PMID:19452453 (2009): ATMG00090.1:None: PMID:19452453 (2009): AT1G53310.1:None: PMID:19452453 (2009): AT5G35790.1:None: PMID:19452453 (2009): ATCG00500.1:None: PMID:19452453 (2009): AT1G32900.1:None: PMID:19452453 (2009): AT1G10760.1:None: PMID:19452453 (2009): AT5G50950.1:None: PMID:19452453 (2009): AT4G02020.1:None: PMID:19452453 (2009): AT3G50000.1:None: PMID:19452453 (2009): AT3G48340.1:None: PMID:19452453 (2009): AT3G14470.1:None: PMID:19452453 (2009): AT3G53760.1:None: PMID:19452453 (2009): AT4G14960.1:None: PMID:19452453 (2009): AT4G02680.1:None: PMID:19452453 (2009): AT4G03080.1:None: PMID:19452453 (2009): AT3G59220.1:None: PMID:19452453 (2009): AT4G04910.1:None: PMID:19452453 (2009): AT4G00360.1:None: PMID:19452453 (2009): AT1G24280.1:None: PMID:19452453 (2009): AT4G14880.1:None: PMID:19452453 (2009): AT3G59760.1:None: PMID:19452453 (2009): AT4G02060.1:None: PMID:19452453 (2009): AT4G00650.1:None: PMID:19452453 (2009): AT4G12020.1:None: PMID:19452453 (2009): AT4G11280.1:None: PMID:19452453 (2009): AT4G34460.1:None: PMID:19452453 (2009): AT4G37520.1:None: PMID:19452453 (2009): AT4G31800.1:None: PMID:19452453 (2009): AT4G33430.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

no coexpression data

AT5G02490.1 cytosol
AT5G23860.1 cytosol
AT5G16050.1 cytosol
AT5G13160.1 cytosol
AT5G10450.1 cytosol
AT5G09810.1 cytosol
AT4G00650.1 cytosol
AT5G07090.1 cytosol
AT5G03340.1 cytosol
AT5G20920.1 cytosol
AT4G39800.1 cytosol
AT4G09000.1 cytosol
AT4G37770.1 cytosol
AT4G14880.1 cytosol
AT4G14960.1 cytosol
AT4G26200.1 cytosol
AT4G32180.1 cytosol
AT3G16650.1 cytosol
AT1G22300.1 cytosol
AT5G67510.1 cytosol
AT5G66280.1 cytosol
AT5G65430.1 cytosol
AT1G35160.1 cytosol
AT1G53310.1 cytosol
AT2G42590.1 cytosol
AT5G58550.1 cytosol
AT5G49500.1 cytosol
AT5G49060.1 cytosol
AT5G38480.1 cytosol
AT3G46710.1 cytosol
AT5G27000.1 cytosol
AT3G50000.1 endoplasmic reticulum
AT4G00360.1 endoplasmic reticulum
AT5G37500.1 endoplasmic reticulum
AT5G05340.1 extracellular
AT4G37520.1 extracellular
AT4G37530.1 extracellular
AT3G57260.1 extracellular
AT3G48340.1 extracellular
AT3G28200.1 extracellular
AT4G04910.1 golgi
AT3G59760.1 mitochondrion
AT5G13490.1 mitochondrion
AT5G26860.1 mitochondrion
AT4G33010.1 mitochondrion
ATMG00090.1 mitochondrion
AT5G50950.1 cytosol, mitochondrion
AT5G45050.1 nucleus
AT3G28030.1 nucleus
AT5G52830.1 nucleus
AT5G55300.1 nucleus
AT5G57380.1 nucleus
AT3G53570.1 nucleus
AT5G23430.1 nucleus
AT3G58040.1 nucleus
AT3G59220.1 nucleus
AT4G30935.1 nucleus
AT4G02060.1 nucleus
AT4G31800.1 nucleus
AT4G12020.1 nucleus
AT4G11280.1 nucleus
AT4G03080.1 nucleus
AT4G02680.1 nucleus
AT4G02020.1 nucleus
AT5G56030.1 cytosol, nucleus
AT4G35090.1 peroxisome
AT3G53760.1 plasma membrane
AT3G14470.1 plasma membrane
AT4G33430.1 plasma membrane
AT5G48400.1 plasma membrane
AT5G04930.1 plasma membrane
AT5G19280.1 plasma membrane
AT4G39400.1 plasma membrane
AT5G27100.1 plasma membrane
AT4G34460.1 endoplasmic reticulum, plasma membrane
AT5G04870.1 peroxisome, plasma membrane
AT3G25810.1 plastid
AT3G20330.1 plastid
AT1G10760.1 plastid
AT4G33510.1 plastid
AT4G39980.1 plastid
AT5G04140.1 plastid
AT5G03940.1 plastid
AT1G32900.1 plastid
AT1G24280.1 plastid
ATCG00500.1 plastid
AT5G35790.1 plastid
AT5G64050.1 mitochondrion, plastid
AT5G33280.1 vacuole
AT1G34760.1 vacuole

Description (TAIR10)

protein_coding : Ycf1 protein

Curator
Summary (TAIR10)

hypothetical protein

Computational
Description (TAIR10)

YCF1.2; FUNCTIONS IN: protein binding; LOCATED IN: chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATCG01000.1).

Protein Annotations

BioGrid:29918	eggNOG:ENOG410IVJT	eggNOG:ENOG4112D2K	EMBL:AP000423
EnsemblPlants:ATCG01130	EnsemblPlants:ATCG01130.1	entrez:4386139	entrez:844706
GeneID:4386139	GeneID:844706	Genevisible:P56785	GO:GO:0008565
GO:GO:0009706	GO:GO:0016021	Gramene:ATCG01130.1	hmmpanther:PTHR33163
hmmpanther:PTHR33163:SF3	InParanoid:P56785	IntAct:P56785	InterPro:IPR008896
iPTMnet:P56785	KEGG:ath:ArthCp070	KEGG:ath:Arthcp087	ncoils:Coil
PaxDb:P56785	Pfam:P56785	Pfam:PF05758	PRIDE:P56785
PRO:PR:P56785	ProteinModelPortal:P56785	Proteomes:UP000006548	RefSeq:NP_051105.1
RefSeq:NP_051117.1	STRING:3702.ATCG01130.1	TAIR:ATCG01000	TAIR:ATCG01130
tair10-symbols:YCF1.2	TCDB:3.A.9.1.2	TMHMM:TMhelix	UniProt:P56785

Coordinates (TAIR10)

chrC:-:123884..129244

Molecular Weight (calculated)

213707.00 Da

IEP (calculated)

10.36

GRAVY (calculated)

-0.53

Length

1786 amino acids

Sequence (TAIR10)
(BLAST)

0001: VMVFQSFILG NLVSLCMKII NSVVVVGLYY GFLTTFSIGP SYLFLLRARV MDEGEEGTEK KVSATTGFIA GQLMMFISIY YAPLHLALGR PHTITVLALP
0101: YLLFHFFWNN HKHFFDYGST TRNEMRNLRI QCVFLNNLIF QLFNHFILPS SMLARLVNIY MFRCNNKMLF VTSSFVGWLI GHILFMKWVG LVLVWIQQNN
0201: SIRSNVVIRS NKYKFLVSEL RNSMARIFSI LLFITCVYYL GRIPSPIFTK KLKGTSETGG TKQDQEVSTE EAPFPSLFSE EGEDLDKIDE MEEIRVNGKD
0301: KINKDDEFHV RTYYNYKTVS ENLYGNKENS NLEFFKIKKK EDHFLWFEKP FVTLVFDYKR WNRPNRYIKN DKIENIVRNE MSQYFFYTCQ SDGKERISFT
0401: YPPNLSTFFE MIQKRIPSFT KEKKTFDQVS TYWSLIHEEK RENLKKEFLN RIEALDKEWS VENILEKTTR FCYNEAKKEY LPKIYDPFLH GISRGRIKKL
0501: PPFQIITETY RKNNLGGSWI NKIHGLLLKI NYKKFEQTIE KFNRKSLSIE KKLSFFSEPQ QEEKINSEEE IKTFKFLFDI VRTDSNDQTL IKNFMDFPEI
0601: NKKVPRWSYK LISELEELEG ENEENVPMEP GIRSRKAKRV VVFTDKEPHG EIYTNLKDNQ NSDQNDEMAL IRYSQQSDFR REIIKGSMRS QRRKTVIWEF
0701: FQAKVHSPLF FDRIDKLFFF SFDIWGLKKK IIKNFIWKKK IDKKEEEQSK REETRRIEIA ETWDSFLFAQ IIRGSLLVTQ SILRKYIILP LLIIIKNSVR
0801: MLLFQFPEWS QDLKDWKREM HVKCTYNGVQ LSETEFPRNW LTDGIQIKIL FPFYLKPWHK SKFQASQKAR LKKTKDKGEK NDFCFLTVWG METELPFGSA
0901: QRKPSFFEPI SKELKKRIKK LKKKSFVVLK IFKERAPIFL KVAKETKNWI LKNFIFIKGI SKRNLIPLFG PREIYELNEP KKDSIISNQM IHELSVQNKS
1001: LEWTNSSLSE KKIKNLIDRK KTIRNQIEEI SKEKQNLTNS CTKLRYDSKI IESSKKIWQT FKRKNTRLIR KSIFFFKFCI EQMSIAIFLG IINIPRITTQ
1101: LFFESTKKIL DKYIYKNEEN GEKKKNTLYF ISTIKNLISN KKKMSYDLCS LSQAYVFYKL SQIKVSNFCK LKAVLEYNIC ITSFFVKNKI KVFFQEHGIF
1201: HYELKNKTFL NSEVNQWKNW LRSQYQYNLP QISWARLVTQ NWKNKINKDS LVLNPSLTKE DSYEKKKFDN YKKQKFFEAD SLLNPKHNVK KDSIYNLFCY
1301: KSIHSTEKNF DMSIGIALDN CLVSSFLEKY NIRGMGEIRH RKYLDWRILN FWFTKKVTIE PWVDTKSKKK YINTKVQNYQ KIDKITQTDL ANKKRNFFDW
1401: MGMNEEILNQ RITNFEFFFF PEFFLFSSTY KMKPWVIPIK LLLLNFNENI NVNKKIIRKK KGFIPSNEKE SLRFYNLNKE EKESAGQVEL ESDKETKRNP
1501: EAARLNQEKN IEENFAESTI KKRKNKKQYK SNTEAELDLF LTRYSRFQLR WNCFFNQKIL NNVKVYCLLV RLNNPNEIAV SSIERGEMSL DILMIEKNFT
1601: FAKLMKKGIL IIEPVRLSVQ NDGQLIIYRT IGISLVHKNK HKISKRYKKK SYINKKFFEK SITKYQNKTV NKKKNNYDFF VPEKILSPKR RREFRILICF
1701: NLKKKNARDT NSRFDKNIQN LTTVLHKKKD LDLDKDKNNL INLKSFLWPN FKLEDLACMN RYWFNTTNGN HFSMIRIRMY TRFPIP