AT1G53730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : STRUBBELIG-receptor family 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
STRUBBELIG-receptor family 6 (SRF6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 7 (TAIR:AT3G14350.1); Has 158312 Blast hits to 119064 proteins in 3476 species: Archae - 117; Bacteria - 16807; Metazoa - 46536; Fungi - 8480; Plants - 68549; Viruses - 305; Other Eukaryotes - 17518 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:20061771..20065475 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78089.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 719 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRENWAVVAL FTLCIVGFEL RFIHGATDAS DTSALNTLFS GMHSPAQLTQ WTAAAGDPCG QNWRGVTCSG SRVTQIKLSG LELSGTLGGY MLDKLTSLTE 101: LDLSSNNLGG DLPYQFPPNL QRLNLANNQF TGAASYSLSQ ITPLKYLNLG HNQFKGQIAI DFSKLDSLTT LDFSFNSFTN SLPATFSSLT SLKSLYLQNN 201: QFSGTVDVLA GLPLETLNIA NNDFTGWIPS SLKGITLIKD GNSFNTGPAP PPPPGTPPIR GSPSRKSGGR ESRSSDESTR NGDSKKSGIG AGAIAGIIIS 301: LLVVTALLVA FFLFRRKKSK RSSPMDIEKT DNQPFTLASN DFHENNSIQS SSSVETKKLD TSLSINLRPP PIDRNKSFDD EDSTRKPIAV KKSTVVVPSN 401: VRLYSVADLQ IATGSFSVDN LLGEGTFGRV YRAEFDDGKV LAVKKIDSSA LPHGMTDDFI EMVSKIANLD HPNVTKLVGY CAEHGQHLVV YEFHKNGSLH 501: DFLHLSEEES KALVWNSRVK IALGTARALE YLHEVCSPSI VDKNIKSANI LLDSELNPHL SDSGLASFLP TANELLNQTD EGYSAPEVSM SGQYSLKSDI 601: YSFGVVMLEL LTGRKPFDST RSRSEQSLVR WATPQLHDID ALAKMVDPAL KGLYPVKSLS RFADVIALCV QPEPEFRPPM SEVVQALVVL VQRANMSKRT 701: VGVDPSQRAG SADTTSDYM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)