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AT4G31840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
TAIR : plasma membrane 17644812
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31541795 (2020): plasma membrane
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21109274 (2011): extracellular region
  • PMID:20843791 (2010): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : early nodulin-like protein 15
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
early nodulin-like protein 15 (ENODL15); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1458 Blast hits to 1409 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY7PeggNOG:ENOG410YW92EMBL:AL049607EMBL:AL161579
EMBL:AY081324EMBL:AY088377EMBL:BT002545EMBL:CP002687
EnsemblPlants:AT4G31840EnsemblPlants:AT4G31840.1entrez:829313Gene3D:2.60.40.420
GeneID:829313GO:GO:0005886GO:GO:0009055GO:GO:0016021
GO:GO:0031225GO:GO:0046658Gramene:AT4G31840.1hmmpanther:PTHR33021
hmmpanther:PTHR33021:SF8HOGENOM:HOG000237627InterPro:IPR003245InterPro:IPR008972
KEGG:ath:AT4G31840OMA:NEWAQKAPfam:PF02298Pfscan:PS51485
PhylomeDB:Q9SZ51PIR:T06306ProDom:PD003122ProMEX:Q9SZ51
PROSITE:PS51485Proteomes:UP000006548RefSeq:NP_194912.1SMR:Q9SZ51
STRING:3702.AT4G31840.1SUPFAM:SSF49503TAIR:AT4G31840tair10-symbols:AtENODL15
tair10-symbols:ENODL15TMHMM:TMhelixUniGene:At.3049UniProt:Q9SZ51
Coordinates (TAIR10) chr4:+:15401798..15402426
Molecular Weight (calculated) 18962.50 Da
IEP (calculated) 9.18
GRAVY (calculated) 0.08
Length 177 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSLLVTI FLCISVFFFS SVNANEVTVG GKSGDWKIPP SSSFSFNEWA QKARFKVGDF IVFKYEAGKD SVLQVTREAY EKCNTTSPKA SYTDGNTKVK
101: LDQAGPVYFV SGTEGHCQKG QKLRLVVITP RNSAFSPGPS PSEFDGPAVA PTSGAAKLAG GFSVVFGLVL GLWAFFF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)