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AT3G51790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : transmembrane protein G1P-related 1
Curator
Summary (TAIR10)
putative transmembrane protein G1p (AtG1) mRNA, complete
Computational
Description (TAIR10)
transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2332eggNOG:ENOG410II13EMBL:AF049236EMBL:AK227474
EMBL:BT004607EMBL:CP002686EMBL:U72502EnsemblPlants:AT3G51790
EnsemblPlants:AT3G51790.1entrez:824342Gene3D:2.40.50.140GeneID:824342
GO:GO:0005743GO:GO:0005886GO:GO:0016021GO:GO:0018063
GO:GO:0020037Gramene:AT3G51790.1HAMAP:MF_01959hmmpanther:PTHR34128
hmmpanther:PTHR34128:SF2HOGENOM:HOG000009661InterPro:IPR004329InterPro:IPR012340
KEGG:ath:AT3G51790OMA:KARDCECPfam:PF03100PhylomeDB:Q96326
PIR:T51150Proteomes:UP000006548RefSeq:NP_190747.1SMR:Q96326
STRING:3702.AT3G51790.1SUPFAM:SSF82093TAIR:AT3G51790tair10-symbols:ATG1
tair10-symbols:TG1TMHMM:TMhelixUniGene:At.19973UniProt:Q96326
Coordinates (TAIR10) chr3:-:19209893..19210663
Molecular Weight (calculated) 28601.50 Da
IEP (calculated) 9.94
GRAVY (calculated) -0.19
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARLLFRRS SQILRSIQRN PQISSSFESP PCPIFHSLTT ASPDPSRLSS LTFLRSLSIA RRGPTRPKKI DIGAKARQMQ NRRLWTYALT FSCIAGFVVI
101: VLNQFQDQLV FYLTPSDAME KFAENPTKNK FRLGGLVLEG SVAQPAASQE MEFVITDLIT DILVRYKGSL PDLFREGHSV VVEGFIKPYT DEVRKEVSTK
201: PISKKARNLD CFFSATEVLA KHDEKYMPQE VAAAIEKNKK IIEAAATEQA AEVAAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)