AT3G51790.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : transmembrane protein G1P-related 1 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
putative transmembrane protein G1p (AtG1) mRNA, complete | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
transmembrane protein G1P-related 1 (TG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly, protein-heme linkage; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CcmE/CycJ protein (InterPro:IPR004329), Nucleic acid-binding, OB-fold (InterPro:IPR012340); Has 3203 Blast hits to 3203 proteins in 811 species: Archae - 0; Bacteria - 1840; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr3:-:19209893..19210663 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 28601.50 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.94 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||
Length | 256 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAARLLFRRS SQILRSIQRN PQISSSFESP PCPIFHSLTT ASPDPSRLSS LTFLRSLSIA RRGPTRPKKI DIGAKARQMQ NRRLWTYALT FSCIAGFVVI 101: VLNQFQDQLV FYLTPSDAME KFAENPTKNK FRLGGLVLEG SVAQPAASQE MEFVITDLIT DILVRYKGSL PDLFREGHSV VVEGFIKPYT DEVRKEVSTK 201: PISKKARNLD CFFSATEVLA KHDEKYMPQE VAAAIEKNKK IIEAAATEQA AEVAAS |
||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)