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AT1G61640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11390.1); Has 9331 Blast hits to 9278 proteins in 1808 species: Archae - 122; Bacteria - 4378; Metazoa - 406; Fungi - 512; Plants - 679; Viruses - 16; Other Eukaryotes - 3218 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0661eggNOG:KOG1236EMBL:AY140074EMBL:BT002596
EMBL:CP002684EnsemblPlants:AT1G61640EnsemblPlants:AT1G61640.1entrez:842460
ExpressionAtlas:Q8L6Y8GeneID:842460GO:GO:0016301Gramene:AT1G61640.1
hmmpanther:PTHR10566hmmpanther:PTHR10566:SF93HOGENOM:HOG000241098InterPro:IPR004147
InterPro:IPR011009KEGG:ath:AT1G61640KO:K08869OMA:KQHAQVS
Pfam:PF03109PhylomeDB:Q8L6Y8Proteomes:UP000006548RefSeq:NP_176358.2
SMR:Q8L6Y8STRING:3702.AT1G61640.1SUPFAM:SSF56112TAIR:AT1G61640
UniGene:At.36404UniProt:Q8L6Y8
Coordinates (TAIR10) chr1:-:22746629..22749053
Molecular Weight (calculated) 70472.60 Da
IEP (calculated) 10.37
GRAVY (calculated) -0.11
Length 621 amino acids
Sequence (TAIR10)
(BLAST)
001: MTLISRFLIS RVISRTLFSN QNNRTAINVS VKLPQFRIQS NGYHTLGLLH NVKGRFLGSN HHQLARRSYS IAVASNVVKQ HAQVSWGRLV QRVTLSRSWN
101: LPRISQIAQA CSLSLARSHF LLPGLLALTY RQVAYAQRVV PNPVVYSPSH ISPYRSSINF PIVLSSLVFS AVKGVVLIGR ALYLAILFSP NVIMALLGFA
201: CGPRYRQLQY EVLHRTLEKA GPAFIKFGQW IATRPDRFNK DLCLQLSKLH SNAPEHSFAF TKKSIENAFG RKLSEIFEEF DEAPVASGSI AQVHRASLKF
301: QYAGQKVKSS EVAVKVRHPC VEETMKRDFV IINFVARLTT FIPGLNWLRL DECVQQFSVY MLSQVDLSRE ASHLSRFIYN FRGWKDVSFP KPIYPLIHPA
401: VLVETYEHGE SVARYVDGSE GQEKLKAKVA HIGTNALLKM LLVDNFIHAD MHPGNILVRP NNTRRGLFRS RKPHIVFLDV GMTAELSKTD RDNLLGFFKA
501: VARRDGRTAA ERTLKLSKQQ NCPDPQAFIK EVEEAFTFWG TEEGDLVHPA DCMHELFEKM RSHRVNIDGN VSTVMFTTLV LEGWQRKLDP GYDVMRTLQT
601: MLLKTDWMKS LSYTIDGLMA P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)