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AT3G03600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ribosomal protein S2
Curator
Summary (TAIR10)
Structural component of the mitochondrial ribosome small subunit
Computational
Description (TAIR10)
ribosomal protein S2 (RPS2); CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, bacteria/mitochondria/plastid (InterPro:IPR005706); Has 7651 Blast hits to 7651 proteins in 2699 species: Archae - 6; Bacteria - 5327; Metazoa - 160; Fungi - 127; Plants - 183; Viruses - 0; Other Eukaryotes - 1848 (source: NCBI BLink).
Protein Annotations
BioGrid:6544eggNOG:COG0052eggNOG:KOG0832EMBL:AC009327
EMBL:AF273102EMBL:AY084362EMBL:BT003049EMBL:CP002686
EnsemblPlants:AT3G03600EnsemblPlants:AT3G03600.1entrez:821211ExpressionAtlas:Q9GCB9
GeneID:821211Genevisible:Q9GCB9GO:GO:0003735GO:GO:0005763
GO:GO:0006412Gramene:AT3G03600.1hmmpanther:PTHR12534HOGENOM:HOG000120703
InterPro:IPR001865InterPro:IPR005706InterPro:IPR018130InterPro:IPR023591
iPTMnet:Q9GCB9KEGG:ath:AT3G03600KO:K02967OMA:AHMRGNI
PANTHER:PTHR12534PaxDb:Q9GCB9Pfam:PF00318Pfam:Q9GCB9
PhylomeDB:Q0WU50PhylomeDB:Q9GCB9PRIDE:Q9GCB9PRINTS:PR00395
PRO:PR:Q9GCB9PROSITE:PS00962ProteinModelPortal:Q9GCB9Proteomes:UP000006548
RefSeq:NP_187010.1scanprosite:PS00962SMR:Q9GCB9STRING:3702.AT3G03600.1
SUPFAM:SSF52313TAIR:AT3G03600tair10-symbols:RPS2UniGene:At.18448
UniProt:Q0WU50UniProt:Q9GCB9
Coordinates (TAIR10) chr3:-:867847..868506
Molecular Weight (calculated) 24774.20 Da
IEP (calculated) 9.61
GRAVY (calculated) -0.09
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIHAAVIQK LLNTGAHLGR RAAEHHFKQY AYGTRNGMTI IDSDKTLICL RSAAHFVANL AHMRGNIFFV NTNPLFDEII ELTSRRIQGD SYNHNRAMNL
101: WKMGGFLTNS YSPKKFRSRH KKLCFGPTTM PDCVVVFDSE RKSSVILEAS KLQIPVVAIV DPNVPLEFFE KITYPVPARD SVKFVYLFCN VITKCFVAEQ
201: MKLGIKEGSN EDLMKDLAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)