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AT2G35790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111HEEeggNOG:KOG4478EMBL:AC006068EMBL:AC007017
EMBL:AY042895EMBL:AY072456EMBL:CP002685EnsemblPlants:AT2G35790
EnsemblPlants:AT2G35790.1entrez:818151GeneID:818151GO:GO:0005739
GO:GO:0016021Gramene:AT2G35790.1hmmpanther:PTHR13281hmmpanther:PTHR13281:SF0
HOGENOM:HOG000240566InterPro:IPR009724KEGG:ath:AT2G35790OMA:YGPISNT
PANTHER:PTHR13281Pfam:PF06979PhylomeDB:Q9ZQQ1PIR:A84773
Proteomes:UP000006548RefSeq:NP_565823.1STRING:3702.AT2G35790.1TAIR:AT2G35790
TMHMM:TMhelixUniGene:At.23290UniProt:Q9ZQQ1
Coordinates (TAIR10) chr2:+:15040735..15041976
Molecular Weight (calculated) 26416.50 Da
IEP (calculated) 10.07
GRAVY (calculated) -0.24
Length 238 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRSALIHLL RSQSRRLSSS TFTSGYHHRS IAGSWSSSVN PKVRFQVPSL SQRSWASFGA KTREDDDEHK ISIGPQEKKE EKDGGVVYYG PISSTIKKVK
101: LLSLSTCCLS VSLGPVITFM TSPGLNVIMK GAVASTVIFL SASTTAALHW FVSPYVHKLR WQPGSDTFEV EMMTWLGTFS AKTLKFSDIR YPDTQRPYVS
201: FKADGNFYFV DADHCPNKAL LARLTPPKDA HDSAFKNL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)