AT1G07210.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Ribosomal protein S18 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Ribosomal protein S18; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S18 (InterPro:IPR001648); Has 5527 Blast hits to 5527 proteins in 2078 species: Archae - 0; Bacteria - 4261; Metazoa - 44; Fungi - 19; Plants - 203; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:2215320..2216668 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 29621.10 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.09 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.97 | ||||||||||||||||||||||||||||||||||||||||
Length | 261 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSIARFATRS LNNVTFLRPF RPIVSRSLAT NANEDPNQNR SSFDSSDNLD SLFGDYTGND EKSNDFFQHL SKAEKDKRDF NGYNRSGGSR YSGGGSMSKD 101: ETFDPSSDGV DGKLKEAALA YNMDEGDGFK EYSFRPDFNN SWGMNNFPRM QKQMQNPRQN NSKSEVTTEE VLKNADFRNV RFLANFITEA GIIIKRKQTG 201: ISAKAQRKIA REIKTARAFG LMPFTTMGTK AFQFGKTMEN RDQDFEYEVL DDDDEFDEGN A |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)