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AT1G34760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.976
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : general regulatory factor 11
Curator
Summary (TAIR10)
Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.
Computational
Description (TAIR10)
general regulatory factor 11 (GRF11); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 2677 Blast hits to 2669 proteins in 383 species: Archae - 0; Bacteria - 0; Metazoa - 1260; Fungi - 300; Plants - 762; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G34760EnsemblPlants:AT1G34760.1entrez:840380hmmpanther:PTHR18860hmmpanther:PTHR18860:SF12ncoils:CoilPfam:PF00244
scanprosite:PS00796scanprosite:PS00797tair10-symbols:GF14 OMICRONtair10-symbols:GRF11tair10-symbols:RHS5
Coordinates (TAIR10) chr1:-:12744062..12745603
Molecular Weight (calculated) 29123.20 Da
IEP (calculated) 4.72
GRAVY (calculated) -0.57
Length 255 amino acids
Sequence (TAIR10)
(BLAST)
001: MENERAKQVY LAKLNEQAER YDEMVEAMKK VAALDVELTI EERNLLSVGY KNVIGARRAS WRILSSIEQK EESKGNEQNA KRIKDYRTKV EEELSKICYD
101: ILAVIDKHLV PFATSGESTV FYYKMKGDYF RYLAEFKSGA DREEAADLSL KAYEAATSSA STELSTTHPI RLGLALNFSV FYYEILNSPE RACHLAKRAF
201: DEAIAELDSL NEDSYKDSTL IMQLLRDNLT LWTSDLEEGG EQSKGHNQQD EVNKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)