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AT5G14740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:32219438 (2020): cytosol
  • PMID:31932409 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:30135097 (2018): plastid
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22968828 (2012): mitochondrion
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
  • PMID:15574830 (2004): plasma membrane
  • PMID:15322131 (2004): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : carbonic anhydrase 2
Curator
Summary (TAIR10)
Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.
Computational
Description (TAIR10)
carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5122 Blast hits to 5105 proteins in 1527 species: Archae - 36; Bacteria - 3955; Metazoa - 59; Fungi - 207; Plants - 361; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-159-MONOMERBioCyc:ARA:GQT-1930-MONOMERBioCyc:ARA:GQT-1931-MONOMERBioCyc:ARA:GQT-247-MONOMER
BioGrid:16603EC:4.2.1.1eggNOG:COG0288eggNOG:KOG1578
EMBL:AF324712EMBL:AF326863EMBL:AF339686EMBL:AF428428
EMBL:AK317585EMBL:AL391149EMBL:BT000652EMBL:BT000663
EMBL:CP002688EMBL:L18901EMBL:Z26538EnsemblPlants:AT5G14740
EnsemblPlants:AT5G14740.1EnsemblPlants:AT5G14740.2entrez:831326ExpressionAtlas:P42737
Gene3D:3.40.1050.10GeneID:831326Genevisible:P42737GO:GO:0004089
GO:GO:0005829GO:GO:0008270GO:GO:0009507GO:GO:0015976
gramene_pathway:4.2.1.1gramene_pathway:CYANCAT-PWYhmmpanther:PTHR11002hmmpanther:PTHR11002:SF7
HOGENOM:HOG000125183InParanoid:P42737IntAct:P42737InterPro:IPR001765
InterPro:IPR015892iPTMnet:P42737KEGG:00910+4.2.1.1ncoils:Coil
OMA:ASINGWCPANTHER:PTHR11002PaxDb:P42737Pfam:P42737
Pfam:PF00484PRIDE:P42737PRO:PR:P42737PROSITE:PS00704
PROSITE:PS00705ProteinModelPortal:P42737Proteomes:UP000006548RefSeq:NP_568303.2
RefSeq:NP_974782.1scanprosite:PS00704scanprosite:PS00705SMART:SM00947
SMR:P42737STRING:3702.AT5G14740.1SUPFAM:SSF53056SWISS-2DPAGE:P42737
TAIR:AT5G14740tair10-symbols:BETA CA2tair10-symbols:CA18tair10-symbols:CA2
UniGene:At.23743UniPathway:UPA00322UniProt:P42737
Coordinates (TAIR10) chr5:+:4758257..4762382
Molecular Weight (calculated) 36616.80 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.12
Length 331 amino acids
Sequence (TAIR10)
(BLAST)
001: MVPFWTTVSR NGSSDSETTL QSASKATKQY KYPSLRPSHR LSLLFLFPFH LSANGACFRC TCFSHFKLEL RRMGNESYED AIEALKKLLI EKDDLKDVAA
101: AKVKKITAEL QAASSSDSKS FDPVERIKEG FVTFKKEKYE TNPALYGELA KGQSPKYMVF ACSDSRVCPS HVLDFHPGDA FVVRNIANMV PPFDKVKYAG
201: VGAAIEYAVL HLKVENIVVI GHSACGGIKG LMSFPLDGNN STDFIEDWVK ICLPAKSKVL AESESSAFED QCGRCEREAV NVSLANLLTY PFVREGVVKG
301: TLALKGGYYD FVNGSFELWE LQFGISPVHS I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)