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AT3G27280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : prohibitin 4
Curator
Summary (TAIR10)
Part of protein complexes that are necessary for proficient mitochondrial function or biogenesis, thereby supporting cell division and differentiation in apical tissues
Computational
Description (TAIR10)
prohibitin 4 (PHB4); INVOLVED IN: response to stress; LOCATED IN: in 6 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 3 (TAIR:AT5G40770.1); Has 5142 Blast hits to 5142 proteins in 1589 species: Archae - 203; Bacteria - 3017; Metazoa - 622; Fungi - 283; Plants - 261; Viruses - 12; Other Eukaryotes - 744 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0330eggNOG:KOG3083EMBL:AK227607EMBL:AP000381
EMBL:AY087293EMBL:BT003072EMBL:CP002686EnsemblPlants:AT3G27280
EnsemblPlants:AT3G27280.1EnsemblPlants:AT3G27280.2entrez:822347GeneID:822347
Genevisible:Q9LK25GO:GO:0005739GO:GO:0005747GO:GO:0005773
GO:GO:0005774GO:GO:0005886GO:GO:0009505GO:GO:0009507
GO:GO:0016021Gramene:AT3G27280.1Gramene:AT3G27280.2hmmpanther:PTHR23222
HOGENOM:HOG000205692InParanoid:Q9LK25IntAct:Q9LK25InterPro:IPR000163
InterPro:IPR001107KEGG:ath:AT3G27280KO:K17080OMA:VVMENEQ
PANTHER:PTHR23222PaxDb:Q9LK25Pfam:PF01145Pfam:Q9LK25
PhylomeDB:Q9LK25PRIDE:Q9LK25PRINTS:PR00679PRO:PR:Q9LK25
ProteinModelPortal:Q9LK25Proteomes:UP000006548RefSeq:NP_189364.1RefSeq:NP_974369.1
SMART:SM00244STRING:3702.AT3G27280.1SUPFAM:0050593SUPFAM:SSF117892
TAIR:AT3G27280tair10-symbols:ATPHB4tair10-symbols:PHB4UniGene:At.26847
UniProt:Q9LK25
Coordinates (TAIR10) chr3:+:10076904..10078051
Molecular Weight (calculated) 30639.80 Da
IEP (calculated) 7.82
GRAVY (calculated) -0.08
Length 279 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSQQVAISF LTNLAKAAFG LGVAATALNS SLYTVDGGER AVLFDRFRGV LDQTVGEGTH FLIPYLQTPH IYDIRTKPHT FSSKSGTKDL QMVNLTLRVL
101: FRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVANFN ADQLLTERPQ VSALVRDALI KRAREFNIEL DDIAITHLSY GAEFSRAVEA KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EVAATLARSP NVAYLPGGQS MLFNLNPGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)