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AT5G44140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : prohibitin 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
prohibitin 7 (PHB7); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 2 (TAIR:AT1G03860.3); Has 4401 Blast hits to 4399 proteins in 1362 species: Archae - 186; Bacteria - 2303; Metazoa - 487; Fungi - 338; Plants - 217; Viruses - 14; Other Eukaryotes - 856 (source: NCBI BLink).
Protein Annotations
BioGrid:19687eggNOG:COG0330eggNOG:KOG3090EMBL:AB005239
EMBL:CP002688EnsemblPlants:AT5G44140EnsemblPlants:AT5G44140.1entrez:834437
GeneID:834437Genevisible:Q9FFH5GO:GO:0005739GO:GO:0005747
GO:GO:0009506GO:GO:0016020GO:GO:0016021Gramene:AT5G44140.1
hmmpanther:PTHR23222HOGENOM:HOG000205692InParanoid:Q9FFH5IntAct:Q9FFH5
InterPro:IPR000163InterPro:IPR001107KEGG:ath:AT5G44140KO:K17081
OMA:THFKIPLPANTHER:PTHR23222PaxDb:Q9FFH5Pfam:PF01145
Pfam:Q9FFH5PhylomeDB:Q9FFH5PRIDE:Q9FFH5PRINTS:PR00679
PRO:PR:Q9FFH5ProteinModelPortal:Q9FFH5Proteomes:UP000006548RefSeq:NP_199227.1
SMART:SM00244STRING:3702.AT5G44140.1SUPFAM:0050593SUPFAM:SSF117892
TAIR:AT5G44140tair10-symbols:ATPHB7tair10-symbols:PHB7TMHMM:TMhelix
UniGene:At.55347UniProt:Q9FFH5
Coordinates (TAIR10) chr5:+:17762491..17763629
Molecular Weight (calculated) 30761.20 Da
IEP (calculated) 10.18
GRAVY (calculated) -0.21
Length 278 amino acids
Sequence (TAIR10)
(BLAST)
001: MNVKKVPNVP GSPALSALLK LGVIGGLGLY CIGSSMYNVD GGHRAIVFNR FTGIKDRVYP EGTHFKIPLF ERAIIYDVRS RPYVENSQTG SNDLQTVTIG
101: LRVLTRPMGD RLPEIYRTLG QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT NLKFGKEFTE AIEKKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLNS SDLLISKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)