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ATMG00580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NADH dehydrogenase subunit 4
Curator
Summary (TAIR10)
NADH dehydrogenase subunit 4
Computational
Description (TAIR10)
NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1).
Protein Annotations
EC:1.6.5.3eggNOG:COG1008eggNOG:KOG4845EMBL:JF729200
EMBL:JF729201EnsemblPlants:ATMG00580EnsemblPlants:ATMG00580.1entrez:814596
GeneID:814596GO:GO:0005739GO:GO:0008137GO:GO:0016021
GO:GO:0042773Gramene:ATMG00580.1hmmpanther:PTHR22773hmmpanther:PTHR22773:SF88
InterPro:IPR001750InterPro:IPR003918InterPro:IPR010227KEGG:ath:ArthMp051
KO:K03881OMA:CRGLVQKPfam:PF00361PRINTS:PR01437
RefSeq:NP_085518.1STRING:3702.ATMG00580.1tair10-symbols:NAD4TIGRfam:TIGR01972
TIGRFAMs:TIGR01972TMHMM:TMhelixUniProt:G1C2U9
Coordinates (TAIR10) chrM:+:161693..169674
Molecular Weight (calculated) 55235.90 Da
IEP (calculated) 9.37
GRAVY (calculated) 0.69
Length 495 amino acids
Sequence (TAIR10)
(BLAST)
001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)