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AT3G12260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : LYR family of Fe/S cluster biogenesis protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G12260-MONOMERBioGrid:5740eggNOG:ENOG4111S2FeggNOG:KOG3426
EMBL:AC069472EMBL:AP002047EMBL:AY054576EMBL:AY064675
EMBL:CP002686EnsemblPlants:AT3G12260EnsemblPlants:AT3G12260.1entrez:820406
GeneID:820406Genevisible:Q9LHI0GO:GO:0005739GO:GO:0005747
GO:GO:0016020GO:GO:0055114Gramene:AT3G12260.1hmmpanther:PTHR12964
HOGENOM:HOG000200993InParanoid:Q9LHI0IntAct:Q9LHI0KEGG:ath:AT3G12260
KO:K03950OMA:CRSIPTIPaxDb:Q9LHI0Pfam:PF13233
Pfam:Q9LHI0PhylomeDB:Q9LHI0PRIDE:Q9LHI0PRO:PR:Q9LHI0
Proteomes:UP000006548RefSeq:NP_566416.1STRING:3702.AT3G12260.1TAIR:AT3G12260
TCDB:3.D.1.6.3UniGene:At.48649UniGene:At.74053UniProt:Q9LHI0
Coordinates (TAIR10) chr3:-:3909252..3910337
Molecular Weight (calculated) 15083.10 Da
IEP (calculated) 9.45
GRAVY (calculated) -0.24
Length 133 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAPFALRKI GVPPNSANLT EARRRVFDFF RAACRSIPTI MDIYNLQDVV APSQLRYAIS AQIRNNAHIT DPKVIDLLIF KGMEELTDIV DHAKQRHHII
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)