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AT5G47570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:20055eggNOG:ENOG410IXWAeggNOG:ENOG410YKP2EMBL:AB025628
EMBL:AF462836EMBL:AY084983EMBL:AY097354EMBL:CP002688
EnsemblPlants:AT5G47570EnsemblPlants:AT5G47570.1entrez:834807GeneID:834807
Genevisible:Q9FGK0GO:GO:0005747GO:GO:0016021GO:GO:0055114
Gramene:AT5G47570.1hmmpanther:PTHR36401HOGENOM:HOG000077395InParanoid:Q9FGK0
IntAct:Q9FGK0KEGG:ath:AT5G47570OMA:FTPRVYPPaxDb:Q9FGK0
Pfam:Q9FGK0PhylomeDB:Q9FGK0PRIDE:Q9FGK0PRO:PR:Q9FGK0
Proteomes:UP000006548RefSeq:NP_568684.1STRING:3702.AT5G47570.1TAIR:AT5G47570
TMHMM:TMhelixUniGene:At.7966UniProt:Q9FGK0
Coordinates (TAIR10) chr5:-:19292869..19294666
Molecular Weight (calculated) 13212.10 Da
IEP (calculated) 8.48
GRAVY (calculated) 0.06
Length 125 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)