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AT5G18800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cox19-like CHCH family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT3G06310.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:17274eggNOG:ENOG4111ISTeggNOG:KOG3458EMBL:AC068655
EMBL:AK227889EMBL:AY084313EMBL:BT004782EMBL:CP002688
EnsemblPlants:AT5G18800EnsemblPlants:AT5G18800.1EnsemblPlants:AT5G18800.2entrez:831998
GeneID:831998Genevisible:Q8LGE7GO:GO:0005739GO:GO:0005747
GO:GO:0005758GO:GO:0055114Gramene:AT5G18800.1Gramene:AT5G18800.2
hmmpanther:PTHR13344hmmpanther:PTHR13344:SF0HOGENOM:HOG000029106InParanoid:Q8LGE7
IntAct:Q8LGE7InterPro:IPR010625KEGG:ath:AT5G18800KO:K03952
OMA:NKEMDAYPaxDb:Q8LGE7Pfam:PF06747Pfam:Q8LGE7
PhylomeDB:Q8LGE7PRIDE:Q8LGE7PRO:PR:Q8LGE7ProteinModelPortal:Q8LGE7
Proteomes:UP000006548RefSeq:NP_197381.1RefSeq:NP_850849.1SMR:Q8LGE7
STRING:3702.AT5G18800.1TAIR:AT5G18800TCDB:3.D.1.6.3UniGene:At.47513
UniProt:Q8LGE7
Coordinates (TAIR10) chr5:+:6267304..6268393
Molecular Weight (calculated) 11968.50 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.49
Length 106 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSAVDATGN PIPTSAVLTA SAKHIGMRCM PENVAFLKCK KNDPNPEKCL DKGRDVTRCV LGLLKDLHQK CQKEMDDYVG CMYYYTNEFD LCRKEQEAFE
101: KVCPLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)