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AT2G42310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G42310-MONOMERBioCyc:MetaCyc:AT2G42310-MONOMEReggNOG:ENOG410J6HPeggNOG:ENOG410XW71
EMBL:AC005956EMBL:AY072190EMBL:AY096421EMBL:CP002685
EnsemblPlants:AT2G42310EnsemblPlants:AT2G42310.1entrez:818832GeneID:818832
GO:GO:0005739GO:GO:0005747Gramene:AT2G42310.1hmmpanther:PTHR31339
HOGENOM:HOG000243213IntAct:Q9SLC8InterPro:IPR019329KEGG:ath:AT2G42310
OMA:YLFIRTPPfam:PF10183PhylomeDB:Q9SLC8PIR:D84852
Proteomes:UP000006548RefSeq:NP_181760.1STRING:3702.AT2G42310.1TAIR:AT2G42310
UniGene:At.20850UniProt:Q9SLC8
Coordinates (TAIR10) chr2:+:17625251..17625595
Molecular Weight (calculated) 12633.00 Da
IEP (calculated) 9.20
GRAVY (calculated) -0.54
Length 114 amino acids
Sequence (TAIR10)
(BLAST)
001: MPSTQSLTVA AKTLRNRIFS RSGSTSAGPS RWATPGHEER PKGYFMNRTP PAPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLATAG DSSD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)