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AT2G07785.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NADH dehydrogenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NADH dehydrogenase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit 1 (InterPro:IPR001694); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 1A (TAIR:ATMG01275.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G07785-MONOMEReggNOG:COG1005eggNOG:KOG4770EMBL:CP002685
EnsemblPlants:AT2G07785EnsemblPlants:AT2G07785.1entrez:2745467GeneID:2745467
GO:GO:0005886GO:GO:0016020GO:GO:0016021GO:GO:0016491
Gramene:AT2G07785.1hmmpanther:PTHR11432HOGENOM:HOG000131732InParanoid:Q3EC42
InterPro:IPR001694KEGG:ath:AT2G07785KO:K03878PANTHER:PTHR11432
PaxDb:Q3EC42Pfam:PF00146PhylomeDB:Q3EC42PRIDE:Q3EC42
ProteinModelPortal:Q3EC42Proteomes:UP000006548RefSeq:NP_973440.1SMR:Q3EC42
STRING:3702.AT2G07785.1TAIR:AT2G07785TMHMM:TMhelixUniGene:At.67421
UniGene:At.72286UniProt:Q3EC42
Coordinates (TAIR10) chr2:+:3348114..3348413
Molecular Weight (calculated) 10611.20 Da
IEP (calculated) 10.10
GRAVY (calculated) 0.68
Length 99 amino acids
Sequence (TAIR10)
(BLAST)
1: MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)