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AT2G07698.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 0.500
plastid 0.500
ASURE: mitochondrion,plastid
What is SUBAcon?
Predictors External Curations
AmiGO : mitochondrion 11743115
AmiGO : mitochondrion 15276431
AmiGO : mitochondrion 18385124
AmiGO : nucleus 15496452
AmiGO : plasma membrane 17151019
AmiGO : plastid 12938931
AmiGO : plastid 18431481
AmiGO : vacuole 15215502
AmiGO : vacuole 15539469
TAIR : mitochondrion 15276431
TAIR : mitochondrion 11743115
TAIR : plastid 12938931
TAIR : plastid 18431481
TAIR : vacuole 15215502
TAIR : plasma membrane 17151019
TAIR : nucleus 15496452
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:30865669 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29967049 (2018): plastid
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid
  • PMID:24727099 (2014): mitochondrion
  • PMID:24124904 (2013): plastid
  • PMID:24012629 (2013): nucleus
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23673981 (2013): plastid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22923678 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21531424 (2011): plastid
  • PMID:21433285 (2011): plasma membrane
  • PMID:21311031 (2011): mitochondrion
  • PMID:20843791 (2010): plasma membrane
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:19334764 (2009): plasma membrane
  • PMID:19288221 (2010): plastid
  • PMID:18431481 (2008): plastid
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:15496452 (2005): nucleus
  • PMID:15276431 (2004): mitochondrion
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATPase, F1 complex, alpha subunit protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPase, F1 complex, alpha subunit protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, zinc ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: male gametophyte, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase subunit 1 (TAIR:ATMG01190.1); Has 42544 Blast hits to 42509 proteins in 10112 species: Archae - 769; Bacteria - 22602; Metazoa - 1520; Fungi - 703; Plants - 8267; Viruses - 0; Other Eukaryotes - 8683 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0056eggNOG:KOG1353EMBL:CP002685EnsemblPlants:AT2G07698
EnsemblPlants:AT2G07698.1entrez:815374Gene3D:2.40.30.20Gene3D:3.40.50.300
GeneID:815374GO:GO:0005524GO:GO:0005730GO:GO:0005739
GO:GO:0005773GO:GO:0005774GO:GO:0008266GO:GO:0008270
GO:GO:0009507GO:GO:0009941GO:GO:0015986GO:GO:0015991
GO:GO:0016020GO:GO:0016021GO:GO:0045261GO:GO:0046933
GO:GO:0046961Gramene:AT2G07698.1HAMAP:MF_01346hmmpanther:PTHR15184
hmmpanther:PTHR15184:SF3InParanoid:F4IMB5InterPro:IPR000194InterPro:IPR000793
InterPro:IPR004100InterPro:IPR005294InterPro:IPR020003InterPro:IPR023366
InterPro:IPR027417iPTMnet:F4IMB5KEGG:00190+3.6.3.14KEGG:ath:AT2G07698
KO:K02132ncoils:CoilPANTHER:PTHR15184:SF3PaxDb:F4IMB5
Pfam:PF00006Pfam:PF00306Pfam:PF02874PhylomeDB:F4IMB5
PRIDE:F4IMB5PROSITE:PS00152ProteinModelPortal:F4IMB5Proteomes:UP000006548
RefSeq:NP_178788.1scanprosite:PS00152SMR:F4IMB5STRING:3702.AT2G07698.1
SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TAIR:AT2G07698
TIGRfam:TIGR00962TIGRFAMs:TIGR00962TMHMM:TMhelixUniGene:At.47774
UniProt:F4IMB5
Coordinates (TAIR10) chr2:+:3361474..3364028
Molecular Weight (calculated) 85938.20 Da
IEP (calculated) 5.24
GRAVY (calculated) -0.07
Length 777 amino acids
Sequence (TAIR10)
(BLAST)
001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)