AT2G07695.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cytochrome C oxidase subunit II-like, transmembrane domain | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cytochrome C oxidase subunit II-like, transmembrane domain; FUNCTIONS IN: electron carrier activity, cytochrome-c oxidase activity, copper ion binding, heme binding; INVOLVED IN: electron transport chain, respiratory electron transport chain; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1); Has 16829 Blast hits to 16827 proteins in 5756 species: Archae - 0; Bacteria - 420; Metazoa - 14050; Fungi - 393; Plants - 303; Viruses - 0; Other Eukaryotes - 1663 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:3346951..3347826 | ||||||||
| Molecular Weight (calculated) | 33555.40 Da | ||||||||
| IEP (calculated) | 4.64 | ||||||||
| GRAVY (calculated) | -0.01 | ||||||||
| Length | 291 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MIVLKWLFLT ISPCDAAEPW QLGSQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA LWHFHYKKNA IPQRIVHGTT IEILRTIFPC FISIFIVEPS 101: FALALDDAAE ALFPNTAPTP SNTSSSEDSF GLSVLSEPWP ITRNLGLESS ICNRIRLLEA ANSPFLLGKE KGQYWGEIQE CLYNVSEQRE YYRLLDFENR 201: DLQIRERKHS CLEVFRGVLL RNPYLEERAA YSPQEAFFDF LNERRDALDI SNPGSSPAEM DRLEILFLGE IERDLLRRGD ESLYIKQLLG D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)