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AT3G06310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cox19-like CHCH family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cox19-like CHCH family protein; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G18800.2); Has 415 Blast hits to 415 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 109; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111ISTeggNOG:KOG3458EMBL:AC011623EMBL:AY087020
EMBL:AY093230EMBL:AY128825EMBL:CP002686EnsemblPlants:AT3G06310
EnsemblPlants:AT3G06310.1EnsemblPlants:AT3G06310.3entrez:819805ExpressionAtlas:Q9SQT4
GeneID:819805Genevisible:Q9SQT4GO:GO:0005747GO:GO:0005758
GO:GO:0009536GO:GO:0055114hmmpanther:PTHR13344hmmpanther:PTHR13344:SF0
HOGENOM:HOG000029106InParanoid:Q9SQT4IntAct:Q9SQT4InterPro:IPR010625
OMA:HQRCPKEPaxDb:Q9SQT4Pfam:PF06747Pfam:Q9SQT4
PhylomeDB:Q9SQT4PRIDE:Q9SQT4PRO:PR:Q9SQT4ProteinModelPortal:Q9SQT4
Proteomes:UP000006548RefSeq:NP_001189824.1RefSeq:NP_566280.1SMR:Q9SQT4
STRING:3702.AT3G06310.1TAIR:AT3G06310UniGene:At.40542UniGene:At.67864
UniProt:Q9SQT4
Coordinates (TAIR10) chr3:-:1913260..1914174
Molecular Weight (calculated) 12160.80 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.46
Length 108 amino acids
Sequence (TAIR10)
(BLAST)
001: MEANAAVDGT GNPIPTSAVL TASAKHIGIR CMPENMAFLK CKKNDPNPEK CLEKGRDVTR CVLGLLKDLH QRCPKEMDAY VGCMYYYTNE FELCRKEQEA
101: FEKVCPLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)