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AT4G37830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome c oxidase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 184 Blast hits to 184 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
DNASU:829939eggNOG:ENOG411253XeggNOG:KOG3469EMBL:AF326892
EMBL:AF339709EMBL:AF380645EMBL:AK228845EMBL:AL035709
EMBL:AL161592EMBL:AY056090EMBL:AY088604EMBL:CP002687
EnsemblPlants:AT4G37830EnsemblPlants:AT4G37830.1entrez:829939ExpressionAtlas:Q9T070
Gene3D:4.10.95.10GeneID:829939Genevisible:Q9T070GO:GO:0004129
GO:GO:0005739GO:GO:0005751hmmpanther:PTHR11504HOGENOM:HOG000193965
InParanoid:Q9T070InterPro:IPR001349OMA:SVAPKRNPANTHER:PTHR11504
PaxDb:Q9T070Pfam:Q9T070PhylomeDB:Q9T070PIR:T06030
PIRSF:PIRSF000277PRIDE:Q9T070PRO:PR:Q9T070ProDom:PD006036
ProteinModelPortal:Q9T070Proteomes:UP000006548RefSeq:NP_195496.1SMR:Q9T070
STRING:3702.AT4G37830.1SUPFAM:0041783SUPFAM:SSF81411TAIR:AT4G37830
UniGene:At.2877UniProt:Q9T070
Coordinates (TAIR10) chr4:-:17787672..17788762
Molecular Weight (calculated) 11235.30 Da
IEP (calculated) 9.51
GRAVY (calculated) -0.50
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MATAIVRSAL SRAVTRAAPK TSVAPKRNFS SSAGHDDAYE AAKWEKITYL GIASCTALAV YVLSKGHHHG EDPPAYPHMH IRNKEFPWGP DGLFEVKHNK
101: EH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)