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AT3G03070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NADH-ubiquinone oxidoreductase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NADH-ubiquinone oxidoreductase-related; CONTAINS InterPro DOMAIN/s: Zinc finger, CHCC-type (InterPro:IPR019401), NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria (InterPro:IPR016668); Has 288 Blast hits to 288 proteins in 139 species: Archae - 0; Bacteria - 2; Metazoa - 142; Fungi - 84; Plants - 40; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Protein Annotations
BioGrid:6466eggNOG:ENOG4111W6XeggNOG:KOG3456EMBL:AC012328
EMBL:AF325039EMBL:AK227975EMBL:AY087471EMBL:BT004574
EMBL:CP002686EMBL:Z17587EnsemblPlants:AT3G03070EnsemblPlants:AT3G03070.1
entrez:821133Gene3D:2.60.260.40GeneID:821133Genevisible:Q9M9M6
GO:GO:0005739GO:GO:0005743GO:GO:0055114GO:GO:0070469
Gramene:AT3G03070.1hmmpanther:PTHR13156HOGENOM:HOG000161276InParanoid:Q9M9M6
InterPro:IPR016668InterPro:IPR019401KEGG:ath:AT3G03070KO:K03939
OMA:LVGNHTAPaxDb:Q9M9M6Pfam:PF10276Pfam:Q9M9M6
PhylomeDB:Q9M9M6PIRSF:PIRSF016564PRIDE:Q9M9M6PRO:PR:Q9M9M6
ProteinModelPortal:Q9M9M6Proteomes:UP000006548RefSeq:NP_566191.1SMR:Q9M9M6
STRING:3702.AT3G03070.1TAIR:AT3G03070TCDB:3.D.1.6.3UniGene:At.47523
UniGene:At.67901UniProt:Q9M9M6
Coordinates (TAIR10) chr3:-:696593..698069
Molecular Weight (calculated) 12234.80 Da
IEP (calculated) 7.51
GRAVY (calculated) -0.25
Length 110 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNLLKALI RSQILPSSRR NFSVATTQLG IPTDDLVGNH TAKWMQDRSK KSPMELISEV PPIKVDGRIV ACEGDTNPAL GHPIEFICLD LNEPAICKYC
101: GLRYVQDHHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)