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AT4G26710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.587
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATPase, V0 complex, subunit E
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT5G55290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41121M0eggNOG:KOG3500EMBL:AL035440EMBL:AL161565
EMBL:AY084532EMBL:AY093013EMBL:BT000074EMBL:CP002687
EnsemblPlants:AT4G26710EnsemblPlants:AT4G26710.1EnsemblPlants:AT4G26710.2entrez:828778
GeneID:828778Genevisible:Q9SZ13GO:GO:0000139GO:GO:0005773
GO:GO:0005789GO:GO:0015078GO:GO:0015991GO:GO:0016021
GO:GO:0033179Gramene:AT4G26710.1Gramene:AT4G26710.2hmmpanther:PTHR12263
hmmpanther:PTHR12263:SF4HOGENOM:HOG000265078InParanoid:Q9SZ13InterPro:IPR008389
KEGG:ath:AT4G26710KO:K02153OMA:FCARICCPANTHER:PTHR12263
PaxDb:Q9SZ13Pfam:PF05493Pfam:Q9SZ13PhylomeDB:Q9SZ13
PIR:T04794PRO:PR:Q9SZ13Proteomes:UP000006548RefSeq:NP_194401.1
RefSeq:NP_974623.1STRING:3702.AT4G26710.1TAIR:AT4G26710TMHMM:TMhelix
UniGene:At.32164UniProt:Q9SZ13
Coordinates (TAIR10) chr4:+:13468705..13469668
Molecular Weight (calculated) 7685.88 Da
IEP (calculated) 7.12
GRAVY (calculated) 1.39
Length 70 amino acids
Sequence (TAIR10)
(BLAST)
1: MAFVVTSLIF AVVGIIASIC TRICFNKGPS TNLLHLTLVI TATVCCWMMW AIVYIAQMNP LIVPILSEVE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)